| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5804 |
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| Symbol | |
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| ID | 6247378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 311059 |
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| End bp | 312006 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597514 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001861916 |
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| Protein GI | 186470598 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.365459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.341823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTA CTCTCGTCTA CACGCACGCC GCCTGCCTGA ACCATCAGCC AGGGCCGCAT
CATCCCGAGT CGCCGAAGCG GCTCGACACC GTGCTGAAAA CTTTGCGCTC GCCGGAATTC
GCCGCGCTCG CATGGCGCGA CGCGCCGATG GGCACCGTCG AACAGGTGCA GCTCATTCAC
CGCCAGGACT TCATCGACGA GGTTGCCGAG AGCGCGCCGT CGCACGGTTA TATGCCTCTC
GACGGCGGTG ATACCGTGAT GTCGCCGGGT TCGTGGGAAG CCGTGATGCG CTGCGTCGGT
GCGGCGTGCG CGGGCGTCGA TGCCGTGCTG GCCGGCGAAG CGCGCAATGT GTTCTGCGCG
ACGCGCCCAT GCGGGCATCA TGCCGAGCCG TCGAAGGCAA TGGGTTTTTG CATCTTCAAT
CAGGCCGCCA TCGCCGCGGC GTATGCATAT GAAGTGCACA AACTCGAACG CGTGGCCGTA
GTCGATTTCG ACGTGCATCA TGGCAACGGC ACGCAGGCCG CATTCTACAA CCGGCCCGAA
CTCTTCTACG CATCGAGCCA TCAATCGCCG CTGTATCCCG GCACGGGCAA GGCAGCCGAA
ACGGGCGTGA GCCACAACGT CCTCAATGTG CCGCTGCCTC CTGGTTGTGA TTCGCAACTG
TTTCGATCGC GCATCGAACT CGACATGCTG CCCGCCTTGC GCGAATTCAA CCCCGAACTC
GTCATCATTT CAGCGGGCTT CGATGCGCAT CGTCTCGATC CCCTCGCCGC GCTGCGTCTC
GACGACGACG ACTTCTACTG GATCACGCGC GAACTGGTGA AGATCGCCGA CGACACATGC
GGGGGCCGTA TCGTGTCGAT ACTCGAAGGC GGATACAGCA TGGAGGGGCT GTCGGGCGGC
ACGCGCGCGC ATGTGCTTGC GTTGATGGGG CAACAGCCTC AACGTTAA
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| Protein sequence | MPPTLVYTHA ACLNHQPGPH HPESPKRLDT VLKTLRSPEF AALAWRDAPM GTVEQVQLIH
RQDFIDEVAE SAPSHGYMPL DGGDTVMSPG SWEAVMRCVG AACAGVDAVL AGEARNVFCA
TRPCGHHAEP SKAMGFCIFN QAAIAAAYAY EVHKLERVAV VDFDVHHGNG TQAAFYNRPE
LFYASSHQSP LYPGTGKAAE TGVSHNVLNV PLPPGCDSQL FRSRIELDML PALREFNPEL
VIISAGFDAH RLDPLAALRL DDDDFYWITR ELVKIADDTC GGRIVSILEG GYSMEGLSGG
TRAHVLALMG QQPQR
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