Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5744 |
Symbol | |
ID | 6247320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 247572 |
End bp | 250334 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642597456 |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_001861858 |
Protein GI | 186470540 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria [COG4253] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATGGC TTGACCAACC CCGCACGCTG GAGATCGTCA GCGCAGGCCT GCCGAAGTGG CAGGACGAAT GCCTGTTCAC CGTATCGCGC CTGACCGGCA CCGAAAAGCT CGGCAGGCTC TACGACTACA CCGTCGAGAT TGCGACGAAG GACGATATCG GCCTGACCGT GCATGAGGCC AGGGAGATGG TCGAGGTCGA CAAGCTGGTC GGCAAGCAGG TGACGGTGAA GATCGCTACC GAGGGTAGCG GCACCTACGA GACGGGAACA ATCGGCGTGT CCCCGTCGAT CAATATCGGC GCAGGCGTGC GCGAGATCAC CGGCCTGATC GTCTCGGCAG AGTGCGTCGG CTCGGATACG CGGCGGGCGT TCTACCGCTT GCGGATTCGC CCATGGCTCT TTTTAGCGAC CCTCAACCAG GACTCAAGAA TCTTCCAGGA CCTCACGGTC AAGGAAATCT CCGAAACGAT CCTGAAAAAG TATCCGTTTC ACTATGAACT GCGCCTGGCC GGCCCCGGCT TTGGCCGGCA GTATCCGAAG CGCGACTACC AGCGCATGTT CTGGGAGAGC GACTGGGGCT ATCTGAACCG CCTGTGGCAG GAATGGGGCA TCACGTTCTT CTACGATGGC CCGACGCTCG TGCTGTGCGA TTCGACCGCC GCCTACAAGA AGCACGGCCC CGCGTATGCA ACGCTACGAT ACCAGGACCG CGACGGCCAG CGCATTGACG AGGAACACGT CCACCAGTTC GAGATTGCGC GCGCCCTGAC CACGGGCAAG GTCAGCGTCA CCGACTACGA CTACACGCAG TCGCGCGCGA ATCTCGCCGC GAAGGATTCG GACTACCGCG AGCGCGCGAA CGACAACATC GAGCACTACG CCTGGGGCGA CTACTCGCAG CCGCTGGCCG GGGCGATGGG GACCGCCGCG CAGCCCAATG AGGTGGACTT CGAGGGCGAG CACCTGGCAC GGGTGCGGCT GGAGGCAAAG CGGGCGAAGA GCCTGCGCGG CAAGGGGCGC GGCAACATGC GCGGGCTGAG GGTGGGCTAC ACGTTCCACC TGGAAGGCTA TCCGCTCGCA CCGGGCAATG GCGAATACCT GGTCGTCGCG ACGAAGATCG AGATCGTCAA CAACGACACG GTGACGAACC GGGGTGCGCT GCAACGTCAG TACACGTGCG ACACGCAGTT CACGGTGCAG CCCGCCAATA CATATTTCCG CACGCCGCAG AAGGCGAAAA AACCGCGCTC GCACGGCGAG GTGGCGATTG TGACGGGCTA TTCGGATTCA AAAATCTGGA CCGACAGGTA TGGCCGCGCG AAGGTCTGGT TCCCGTGGGA TCGCGAGGGC CAGCAGGACC AGGACTCAAG CTGCTGGGTG CGGGTGTCGT CGCCATGGCA GGGTGCGAAC TACGGCGCGA TCTACATTCC GCGCGCGGGC CACGAGGTGG TGATCGGGTA TCAGGACAAT GATCCGGACA AGCCGTATAT CGCGGGACGG CACGTGAACC AGTTCCACGA ACCGCCGTGG CCGCTGCCCG CCAACCAGGC GCTTTCGGGC TGGCTGAGCG AGGACCTGGA GGGTCCGACG ACGAACAGCG TTGTCACCGA CGATACGCCC GGCAAGCTCC AGGTGCAGGT GGCGAGCGAC CACGCGGCCT CGCGCCTGGT GCTGGGCAGC AATACGCGCA TCGACCGGCG CAAGGGCCGC AGCGAGGCGC GCGGCGAGGG GTTCGAACTG GCGACCGAGG CGCATGGAGT CGCCCGGGCC AACCTGGGCA TGCTCATCAC GACAGAAAAG CGAGAAGGCG CGAGCGCACC CGTAAAGGAC ATGGTCGAGA CCGTGCAGCG GCTTACGCAG GCGCGCCAAC TGCACGAGGA CCTGTCGCAG GCTGCCCGGA AGCACACCGC ACAGACTCTC GAGGCAAACC AGAGTGAGGC CACGACCACC ATTAAGGTGC AGAACGACGC GGTCAAGGGT GGTGTGAAGA GCGTGGCCAA TCCTTCGCCC GAGATGACAC GTCCCGACGT GGTGATCTCC AGCGCTTCAG GTATCGCAAC CACTGCCACG GACAGTACGC ACATGGCGAG CATGAATGAT CATGCGGTGA CGACGGGGCG GGACTTCAGC ATGGCTGTGG GGCGTGCGTA CCACGCTTCA GTACGCGGCT CGATCTCACT GTTTGCATAT CAGGACGCCA TGAAATTCGT CGCTGCGAAA GGGCCGGTGA TCCTGCAATC GCGGAGCAAC AACATTGAAA TCATCGCTGA TCAGGTGCTG AAACTGACCA GTGCAAAGAA GCGCATCGAA ATTACAGCGG CAGAGGAAAT CGTGTTGCAG GCGCGAGGCA GTTACATCCG TATCAATGGA GCGGGTATCG AGCACGGCAC CCCAGCGAAG TGGATCGCTC ACGCAGCGAG CCACGCTTTG CCGGGTCCAA AGTCGATGCC GGCCTCTCTA CCCGAGATGG ATATGCCCAA AGCGTTCAGT AATCGGCTCG ATGCTTACGA TATCTACTGG CTCAGGGATT TTAACGACGT CGAATATGCA GCGAGGCGAG CCAATGGTGA TCTCATTGCG CAGGGTACGC TTGATCAGGA TGGGAGGACA TCTCGCCTCT CAACCGACCA ACCAGAAACC ATTCAGGTGC TTGTGGGGAC GCGGGGAGCA TGGCTGGTTG AAACTGATGG AAGAGAAAAC AATCCGCAAT CAGATGACCC TTTGCCGGAT GACCCAAATC ACTACGTCAA TTTGAGCACG TAA
|
Protein sequence | MSWLDQPRTL EIVSAGLPKW QDECLFTVSR LTGTEKLGRL YDYTVEIATK DDIGLTVHEA REMVEVDKLV GKQVTVKIAT EGSGTYETGT IGVSPSINIG AGVREITGLI VSAECVGSDT RRAFYRLRIR PWLFLATLNQ DSRIFQDLTV KEISETILKK YPFHYELRLA GPGFGRQYPK RDYQRMFWES DWGYLNRLWQ EWGITFFYDG PTLVLCDSTA AYKKHGPAYA TLRYQDRDGQ RIDEEHVHQF EIARALTTGK VSVTDYDYTQ SRANLAAKDS DYRERANDNI EHYAWGDYSQ PLAGAMGTAA QPNEVDFEGE HLARVRLEAK RAKSLRGKGR GNMRGLRVGY TFHLEGYPLA PGNGEYLVVA TKIEIVNNDT VTNRGALQRQ YTCDTQFTVQ PANTYFRTPQ KAKKPRSHGE VAIVTGYSDS KIWTDRYGRA KVWFPWDREG QQDQDSSCWV RVSSPWQGAN YGAIYIPRAG HEVVIGYQDN DPDKPYIAGR HVNQFHEPPW PLPANQALSG WLSEDLEGPT TNSVVTDDTP GKLQVQVASD HAASRLVLGS NTRIDRRKGR SEARGEGFEL ATEAHGVARA NLGMLITTEK REGASAPVKD MVETVQRLTQ ARQLHEDLSQ AARKHTAQTL EANQSEATTT IKVQNDAVKG GVKSVANPSP EMTRPDVVIS SASGIATTAT DSTHMASMND HAVTTGRDFS MAVGRAYHAS VRGSISLFAY QDAMKFVAAK GPVILQSRSN NIEIIADQVL KLTSAKKRIE ITAAEEIVLQ ARGSYIRING AGIEHGTPAK WIAHAASHAL PGPKSMPASL PEMDMPKAFS NRLDAYDIYW LRDFNDVEYA ARRANGDLIA QGTLDQDGRT SRLSTDQPET IQVLVGTRGA WLVETDGREN NPQSDDPLPD DPNHYVNLST
|
| |