| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5744 |
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| Symbol | |
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| ID | 6247320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 247572 |
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| End bp | 250334 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597456 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001861858 |
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| Protein GI | 186470540 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATGGC TTGACCAACC CCGCACGCTG GAGATCGTCA GCGCAGGCCT GCCGAAGTGG
CAGGACGAAT GCCTGTTCAC CGTATCGCGC CTGACCGGCA CCGAAAAGCT CGGCAGGCTC
TACGACTACA CCGTCGAGAT TGCGACGAAG GACGATATCG GCCTGACCGT GCATGAGGCC
AGGGAGATGG TCGAGGTCGA CAAGCTGGTC GGCAAGCAGG TGACGGTGAA GATCGCTACC
GAGGGTAGCG GCACCTACGA GACGGGAACA ATCGGCGTGT CCCCGTCGAT CAATATCGGC
GCAGGCGTGC GCGAGATCAC CGGCCTGATC GTCTCGGCAG AGTGCGTCGG CTCGGATACG
CGGCGGGCGT TCTACCGCTT GCGGATTCGC CCATGGCTCT TTTTAGCGAC CCTCAACCAG
GACTCAAGAA TCTTCCAGGA CCTCACGGTC AAGGAAATCT CCGAAACGAT CCTGAAAAAG
TATCCGTTTC ACTATGAACT GCGCCTGGCC GGCCCCGGCT TTGGCCGGCA GTATCCGAAG
CGCGACTACC AGCGCATGTT CTGGGAGAGC GACTGGGGCT ATCTGAACCG CCTGTGGCAG
GAATGGGGCA TCACGTTCTT CTACGATGGC CCGACGCTCG TGCTGTGCGA TTCGACCGCC
GCCTACAAGA AGCACGGCCC CGCGTATGCA ACGCTACGAT ACCAGGACCG CGACGGCCAG
CGCATTGACG AGGAACACGT CCACCAGTTC GAGATTGCGC GCGCCCTGAC CACGGGCAAG
GTCAGCGTCA CCGACTACGA CTACACGCAG TCGCGCGCGA ATCTCGCCGC GAAGGATTCG
GACTACCGCG AGCGCGCGAA CGACAACATC GAGCACTACG CCTGGGGCGA CTACTCGCAG
CCGCTGGCCG GGGCGATGGG GACCGCCGCG CAGCCCAATG AGGTGGACTT CGAGGGCGAG
CACCTGGCAC GGGTGCGGCT GGAGGCAAAG CGGGCGAAGA GCCTGCGCGG CAAGGGGCGC
GGCAACATGC GCGGGCTGAG GGTGGGCTAC ACGTTCCACC TGGAAGGCTA TCCGCTCGCA
CCGGGCAATG GCGAATACCT GGTCGTCGCG ACGAAGATCG AGATCGTCAA CAACGACACG
GTGACGAACC GGGGTGCGCT GCAACGTCAG TACACGTGCG ACACGCAGTT CACGGTGCAG
CCCGCCAATA CATATTTCCG CACGCCGCAG AAGGCGAAAA AACCGCGCTC GCACGGCGAG
GTGGCGATTG TGACGGGCTA TTCGGATTCA AAAATCTGGA CCGACAGGTA TGGCCGCGCG
AAGGTCTGGT TCCCGTGGGA TCGCGAGGGC CAGCAGGACC AGGACTCAAG CTGCTGGGTG
CGGGTGTCGT CGCCATGGCA GGGTGCGAAC TACGGCGCGA TCTACATTCC GCGCGCGGGC
CACGAGGTGG TGATCGGGTA TCAGGACAAT GATCCGGACA AGCCGTATAT CGCGGGACGG
CACGTGAACC AGTTCCACGA ACCGCCGTGG CCGCTGCCCG CCAACCAGGC GCTTTCGGGC
TGGCTGAGCG AGGACCTGGA GGGTCCGACG ACGAACAGCG TTGTCACCGA CGATACGCCC
GGCAAGCTCC AGGTGCAGGT GGCGAGCGAC CACGCGGCCT CGCGCCTGGT GCTGGGCAGC
AATACGCGCA TCGACCGGCG CAAGGGCCGC AGCGAGGCGC GCGGCGAGGG GTTCGAACTG
GCGACCGAGG CGCATGGAGT CGCCCGGGCC AACCTGGGCA TGCTCATCAC GACAGAAAAG
CGAGAAGGCG CGAGCGCACC CGTAAAGGAC ATGGTCGAGA CCGTGCAGCG GCTTACGCAG
GCGCGCCAAC TGCACGAGGA CCTGTCGCAG GCTGCCCGGA AGCACACCGC ACAGACTCTC
GAGGCAAACC AGAGTGAGGC CACGACCACC ATTAAGGTGC AGAACGACGC GGTCAAGGGT
GGTGTGAAGA GCGTGGCCAA TCCTTCGCCC GAGATGACAC GTCCCGACGT GGTGATCTCC
AGCGCTTCAG GTATCGCAAC CACTGCCACG GACAGTACGC ACATGGCGAG CATGAATGAT
CATGCGGTGA CGACGGGGCG GGACTTCAGC ATGGCTGTGG GGCGTGCGTA CCACGCTTCA
GTACGCGGCT CGATCTCACT GTTTGCATAT CAGGACGCCA TGAAATTCGT CGCTGCGAAA
GGGCCGGTGA TCCTGCAATC GCGGAGCAAC AACATTGAAA TCATCGCTGA TCAGGTGCTG
AAACTGACCA GTGCAAAGAA GCGCATCGAA ATTACAGCGG CAGAGGAAAT CGTGTTGCAG
GCGCGAGGCA GTTACATCCG TATCAATGGA GCGGGTATCG AGCACGGCAC CCCAGCGAAG
TGGATCGCTC ACGCAGCGAG CCACGCTTTG CCGGGTCCAA AGTCGATGCC GGCCTCTCTA
CCCGAGATGG ATATGCCCAA AGCGTTCAGT AATCGGCTCG ATGCTTACGA TATCTACTGG
CTCAGGGATT TTAACGACGT CGAATATGCA GCGAGGCGAG CCAATGGTGA TCTCATTGCG
CAGGGTACGC TTGATCAGGA TGGGAGGACA TCTCGCCTCT CAACCGACCA ACCAGAAACC
ATTCAGGTGC TTGTGGGGAC GCGGGGAGCA TGGCTGGTTG AAACTGATGG AAGAGAAAAC
AATCCGCAAT CAGATGACCC TTTGCCGGAT GACCCAAATC ACTACGTCAA TTTGAGCACG
TAA
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| Protein sequence | MSWLDQPRTL EIVSAGLPKW QDECLFTVSR LTGTEKLGRL YDYTVEIATK DDIGLTVHEA
REMVEVDKLV GKQVTVKIAT EGSGTYETGT IGVSPSINIG AGVREITGLI VSAECVGSDT
RRAFYRLRIR PWLFLATLNQ DSRIFQDLTV KEISETILKK YPFHYELRLA GPGFGRQYPK
RDYQRMFWES DWGYLNRLWQ EWGITFFYDG PTLVLCDSTA AYKKHGPAYA TLRYQDRDGQ
RIDEEHVHQF EIARALTTGK VSVTDYDYTQ SRANLAAKDS DYRERANDNI EHYAWGDYSQ
PLAGAMGTAA QPNEVDFEGE HLARVRLEAK RAKSLRGKGR GNMRGLRVGY TFHLEGYPLA
PGNGEYLVVA TKIEIVNNDT VTNRGALQRQ YTCDTQFTVQ PANTYFRTPQ KAKKPRSHGE
VAIVTGYSDS KIWTDRYGRA KVWFPWDREG QQDQDSSCWV RVSSPWQGAN YGAIYIPRAG
HEVVIGYQDN DPDKPYIAGR HVNQFHEPPW PLPANQALSG WLSEDLEGPT TNSVVTDDTP
GKLQVQVASD HAASRLVLGS NTRIDRRKGR SEARGEGFEL ATEAHGVARA NLGMLITTEK
REGASAPVKD MVETVQRLTQ ARQLHEDLSQ AARKHTAQTL EANQSEATTT IKVQNDAVKG
GVKSVANPSP EMTRPDVVIS SASGIATTAT DSTHMASMND HAVTTGRDFS MAVGRAYHAS
VRGSISLFAY QDAMKFVAAK GPVILQSRSN NIEIIADQVL KLTSAKKRIE ITAAEEIVLQ
ARGSYIRING AGIEHGTPAK WIAHAASHAL PGPKSMPASL PEMDMPKAFS NRLDAYDIYW
LRDFNDVEYA ARRANGDLIA QGTLDQDGRT SRLSTDQPET IQVLVGTRGA WLVETDGREN
NPQSDDPLPD DPNHYVNLST
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