| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5743 |
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| Symbol | |
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| ID | 6247319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 245829 |
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| End bp | 247544 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642597455 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001861857 |
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| Protein GI | 186470539 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.538891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAT CCAGTAATGC AAGCGACTAC GTTTCAGACG TAACGGTCTT TTTCAAAGAT
CACTTTGGCG TGCCCATCCA GAATTTGAAA GTTGAGATTA GGGGCATCGA GGATCAGGCT
GGCCATATGT ACCATTCGGC ATCGACAAAT GCACGTGGTG CGATACAGTT TTCTGTTCGG
AAGGGTGAAG AGCTCTCAGT TCACGTTAAA CGCTGGACAA GTGAAAGTAT GAAGGAGGTG
GCTCGACTCA GCGCTGCGCT TTCGCAAATC GCATTTCATC TTACCAGTCC AAAAACGCAG
CACGATTTGC CAACCAAAAC GGATGACTCG GGAGGTGGCA ATTATTGGAG AGGAACCTAC
AAGGTCAAGG CACATGACAA TCTGACCGCA ATTGCCAGGA AGTATCATAC GAGTGTTGAT
CTTCTAAAAC GCGTGAACGG CCTGAAGTCG GATCTAATCG TGGTCGGCCA GACGCTCAAG
GTGCCACCCG TCGAATCACG GAAATCGGAC GAGCCGGTGC CAAAGAAGCC GGCGCCGAGC
GGCACGCCAC CGCAGAACGA TCATTCGAAT AATGACCATG GCGCGCCAAC CACGATGCCT
CGCCGCGGTC CTGCGCCGAT CATCTTCCCG ATCGCAGCCC GTCCGCTCAA CGATGAAGGC
GGCGTCTACG GCACGCCGTC ATGCGACTAC ACGTGGACCA AGCAACTGCA CGGCGGGGGA
TACGATCAGG CGAGATACGG CGCGAACCGA GCGGGCGGCC GAAAACATGC CGCCCGGGAT
CTGTACGTGA AGTCAGATAC GCCGATCGTT GCAATCGCGC CTGGTGTTGT CATAAAGTGC
GAGTTTTTCT ACTGTCACAC GTGGCAGATC AGCATTCACC ATAAGACAAC CGATGGTCGC
GAGTTCATCG CGCTGTACGG CGAAGTTAAG CCTTCATCGA TCACGGTGAA GATCGGGGAC
ACGGTAAACC AAGGGCAGAT CCTCGCGGCT AGCGGCACCC TACTGAAGGC GAACGGCACG
CCGCTGCACG TCGTGGGCAA CGAGAACGTG TCAATGCTGC ATTTCGAGGC GTATTCGGGT
TCTCTTGGAT TTGATTCGCA CTCGAGGCTG AACGGCTCAG CGATGCCCGC GCCATTTCAG
CGGCGTGCGG ATCTGATCGA TTCGCTAACG ATCCTTCTGG AGGGCTACCA GGCAACCTTC
CTCGACGCAC CGCCGCTGAA GGCAGTTGGT CAGCGAATTG CTATTGCGCA ATTGAACATA
TCTGAACAGG GTAAGGCGTT TATCAAGGGC TGGGAAGGGG TCTACTACGA TGATTCGAAG
GCGAATACAT ACTACTACGA CGACAGTAAA GGTTATTGCA CGGTTGGTTG GGGACATTTG
ATCAGCAAAA GCAGTTGTAC GGCGAACGGA TACGTCGCGA TGTCGAGCAA AATCAGTGTC
GCGGACGCGC AGACGTTGTT CGATCGCGAC GTTGCGAGAA TTGAGACGGC TGTGAAGAAT
GCGATCAGTG TGCCGCTCTA TCAATACGAG TACGATGCGC TGGTATCGCT TGCCTACAAC
ATGGGAAGCC TCATAAAGGC CCCCAGTTTG TGCCGTAAGT TGAATAGCGG TGACTACGTC
GGCGCGCCCG CTGAATTCCT GGACATAGAG AACAAGACAC GGCGAGAACG CGAGCACGAC
ATGTTTTGTC TTAATACTTA CAATTCGAAT CACTAA
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| Protein sequence | MQRSSNASDY VSDVTVFFKD HFGVPIQNLK VEIRGIEDQA GHMYHSASTN ARGAIQFSVR
KGEELSVHVK RWTSESMKEV ARLSAALSQI AFHLTSPKTQ HDLPTKTDDS GGGNYWRGTY
KVKAHDNLTA IARKYHTSVD LLKRVNGLKS DLIVVGQTLK VPPVESRKSD EPVPKKPAPS
GTPPQNDHSN NDHGAPTTMP RRGPAPIIFP IAARPLNDEG GVYGTPSCDY TWTKQLHGGG
YDQARYGANR AGGRKHAARD LYVKSDTPIV AIAPGVVIKC EFFYCHTWQI SIHHKTTDGR
EFIALYGEVK PSSITVKIGD TVNQGQILAA SGTLLKANGT PLHVVGNENV SMLHFEAYSG
SLGFDSHSRL NGSAMPAPFQ RRADLIDSLT ILLEGYQATF LDAPPLKAVG QRIAIAQLNI
SEQGKAFIKG WEGVYYDDSK ANTYYYDDSK GYCTVGWGHL ISKSSCTANG YVAMSSKISV
ADAQTLFDRD VARIETAVKN AISVPLYQYE YDALVSLAYN MGSLIKAPSL CRKLNSGDYV
GAPAEFLDIE NKTRREREHD MFCLNTYNSN H
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