| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5729 |
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| Symbol | |
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| ID | 6247307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 226231 |
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| End bp | 228015 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597443 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001861845 |
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| Protein GI | 186470527 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.503116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC GAAAGAGGCT GGCGGCCCTG CCGCTCACAG CCCTGGTAAC ACTCGCGTCT
AACGCGCAAC AAACGCCGGC GCCCGCAGAC GCAGCAGCGG CCGCACGCGC GAACGCCGAA
CAGAACCAGC AGCTCCAGCA GCAGCGCGAC GCGCAGCAAC GCGCAAAGAC GGTCAACGCG
CCGGCAGTAC GCTCGACCGT GCCGAAAGAC GGGGCATATC CCGACCTTCC CCGCGAGACC
CCGTGTTTTC ACATCGACAC ATTCGCGCTC GACGTCCCGG CCACGCTGCG CGACCTCGCG
CGCAAGAACG GCGCTTCCAA CCTGCCGCTC GATCCTTTCT GGTTCGCGCG CGAATGGCTC
GACCACTACC GGGGCGAGTG CATCGGCAAG GCCGGACTCG ACGTGCTCAC GAAGGGCTTG
CAGCAGGTGA TCCTTTCACG CGGCTACGTG ACCACGCGCG TCCTGCTGCC CGAACAGGAC
GTATCGACAG GCACACTGAA AGTCGCACTC GTGCCTGGCA CCGTGCGGCA TCTCCGTTTC
GCCGATCCCG ACACGCGCGG GACATGGAAG TCCGCATTCC CTGCACGCGA CGGCGACCTG
CTGAACCTGC GAGACCTTGA ACAGGGTCTG GAGCAGATGA AGCGCGTCGC GTCGCAGGAC
ATGGACATGA AGATCGAGCC TGCGGAATCT CCGGGCGAAA GCGATGTGGT AATTGCGGTG
AAGCGCGCGA AACCCTGGAG CTTCGTCGCA TCGGTGGACA ACTCAGGCAC GAAGGCGACG
GGCAAATGGC AAGGCAACGT GAGCCTCGGC CTCGACAACC CGCTCGGGCT GAACGACATA
TTGACGGTCG GCGCGTACCA GGACCTGTCA TTCGGCAACA AGACACTCGG CTCACACGGC
TTCAACGGCT CGTACTCCGT GCCGTGGGGC TACTGGACGG CGACGCTGTC GGGCAACACG
AACACCTACT ACCAGAACAT TGCGGGCGTG AACCAGACTT TCGTATCGAG CGGCAACGCG
CAGACGGCCG CGTTCCGTCT CGCGCGCGTG CTCTCGCGTA GCCAGAACGA CGTGTTCAGC
ATGGAGCTGC AACTGTCGAA GCGCTTCGGC GAGAGCTTTA TCGAAGGCAC GTCGATCCCG
ATCCAGGACC GCAACAACAC GTTCGTCGAG GCGGGGCTGA CCGACCGCCA CTACTTCGGC
GCAGCGCAGT TCGACGGAAC ACTGGCATAC CGGCAAGGCA TTCACGGCCT GGGCGCAACG
GGCGACCCCG ACCCGAGCCT GTACGCATCG ACAGACGACG GCAAGCCACT GCCCACCTAC
CTGTACAGGA TGCTCGTGCT CGACGCTAAC CTGTCGGTGC CGTTCGCGAT TGCGACGCAA
AACTTCCGCT ACCTGTCGAC CGTTCACGGC CAGTTCACGA ACGACCGGCT GTTCTACATC
GACGATCTGA CCATCGGCAG CCGCTACACG GTGCGGGGTT TCGACGGCGA AACGATGCTC
GCGGCAGAGA AAGGTTTCTA CTGGCGCAAT GAACTGCAAT GGCCCATCTT TCAGACGGGT
CAGACGTTAT ACGCAGGCAT CGACTACGGG CGCGTGTTCG GGCCGAACAC GGCGATTCTG
GCGGGCACCC AACTCGCGGG CGCGGTGATT GGCATCCGTG GCGGCATTCC GGCGAAGTAC
GCGGGGTTCT CGTATGACCT GTTCGCTGGA ACACCCATCT ACAAACCCGC AGGTTTTCCG
ACCGCGCGCG TCACGGCCGG CGTCCAGGCC ACAATGCAGT TCTGA
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| Protein sequence | MKIRKRLAAL PLTALVTLAS NAQQTPAPAD AAAAARANAE QNQQLQQQRD AQQRAKTVNA
PAVRSTVPKD GAYPDLPRET PCFHIDTFAL DVPATLRDLA RKNGASNLPL DPFWFAREWL
DHYRGECIGK AGLDVLTKGL QQVILSRGYV TTRVLLPEQD VSTGTLKVAL VPGTVRHLRF
ADPDTRGTWK SAFPARDGDL LNLRDLEQGL EQMKRVASQD MDMKIEPAES PGESDVVIAV
KRAKPWSFVA SVDNSGTKAT GKWQGNVSLG LDNPLGLNDI LTVGAYQDLS FGNKTLGSHG
FNGSYSVPWG YWTATLSGNT NTYYQNIAGV NQTFVSSGNA QTAAFRLARV LSRSQNDVFS
MELQLSKRFG ESFIEGTSIP IQDRNNTFVE AGLTDRHYFG AAQFDGTLAY RQGIHGLGAT
GDPDPSLYAS TDDGKPLPTY LYRMLVLDAN LSVPFAIATQ NFRYLSTVHG QFTNDRLFYI
DDLTIGSRYT VRGFDGETML AAEKGFYWRN ELQWPIFQTG QTLYAGIDYG RVFGPNTAIL
AGTQLAGAVI GIRGGIPAKY AGFSYDLFAG TPIYKPAGFP TARVTAGVQA TMQF
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