| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5718 |
|---|
| Symbol | |
|---|
| ID | 6247296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 213820 |
|---|
| End bp | 214812 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642597432 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_001861834 |
|---|
| Protein GI | 186470516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC AGAACTACAC GGCAGCACCA TCGGAATCCC GGCGTCGGCT GCTGTCGGCC
GGGGCGACGA TGGCGGGGGC CGTGGCGGCC ATGTCCAGCC TGGCAGCTAA TGCAGCGGGG
ACGGCCAACG GCGCAGCGGG CGGTCACACG CAGCGCTTGC ACCAGCAAGG TGGCAACTTC
GTGAAGGCGA AGGATGGTAC GGAGATTTTC TTCAAGGACT GGGGCACGGG CACGCCCGTC
GTCTTCTCGC ACGGCTGGCC GCTGTGCGCC GATGCGTGGG ATCCGCAGAT GCTGTTCCTC
GTGAATCAGG GCTACCGCGT GATCGCGCAC GATCGTCGCG GACATGGCCG TTCGGGGCAG
TCGTCGGGCG GCAACGACAT GGACACCTAC GCGGACGATC TGGCCGCCGT GCTCGACGCA
CTGGACGTGA AGAACGCGAT GCTGGTCGGT CATTCGACAG GCGGCGGCGA AGTCGCGCAC
TACATTGGCC GTCATGGTTC GAAGCGCGTT TCGAAGGCCG TGCTGATCGG CGCAGTGCCG
CCGTTGATGC TGAAGACGCA GGTCAATCCG GGCGGTCTGC CGATGTCCGT ATTCGATGGT
ATCCGGACAG GCGTCGCCGT CAATCGCTCG CAGTTCTACC TCGATCTCGC GACGCCGTTC
TACGGCTTCA ACCGATCGAA CGCCAAGGTT TCGCAAGGGC TGATCCAGGA CTTCTGGCGT
CAGGGCATGG AAGGCTCGAT CAAAGGCCAG TACGAGTGCA TCAAGCAGTT CTCCGAAGTC
GACTATACGG ACGATCTGAA GAAGATCGAC GTGCCGACGC TGTTCCTGCA CGGCGACGAC
GACCAGATCG TGCCCATCGA CGCTTCGGCG AAGCTCGCCT CGAAGCTCGT GAAGAACGCA
ACGCTGAAGG TCTATGCAGG CGCGCCGCAC GGCATGTGCA GCACGCATGT CGAGCAGGTC
AACGCAGATC TTCTGTCATT CCTGAAGGCC TGA
|
|---|
| Protein sequence | MSTQNYTAAP SESRRRLLSA GATMAGAVAA MSSLAANAAG TANGAAGGHT QRLHQQGGNF
VKAKDGTEIF FKDWGTGTPV VFSHGWPLCA DAWDPQMLFL VNQGYRVIAH DRRGHGRSGQ
SSGGNDMDTY ADDLAAVLDA LDVKNAMLVG HSTGGGEVAH YIGRHGSKRV SKAVLIGAVP
PLMLKTQVNP GGLPMSVFDG IRTGVAVNRS QFYLDLATPF YGFNRSNAKV SQGLIQDFWR
QGMEGSIKGQ YECIKQFSEV DYTDDLKKID VPTLFLHGDD DQIVPIDASA KLASKLVKNA
TLKVYAGAPH GMCSTHVEQV NADLLSFLKA
|
|---|
| |