| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5655 |
|---|
| Symbol | |
|---|
| ID | 6247161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 137455 |
|---|
| End bp | 138537 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642597373 |
|---|
| Product | tartrate dehydrogenase |
|---|
| Protein accession | YP_001861775 |
|---|
| Protein GI | 186470457 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACCT ATCGCATTGC GACGATCCCC GGTGACGGCA TCGGCAAGGA AGTCGTGCCA
GCCGGCAAGG AAGCGCTGGA AGCGCTCGCA CGCACGAGCG ACGCTTTCCG CTTCGAATTC
GAGAACTTCG ACTGGGGTGC CGACTACTAC CGCGAGCACG GCGTGATGAT GCCCGCCGAC
GGTCTCGACG CGATCCGCGA TAAGGACGCG ATCCTGTTCG GCTCGGCAGG CGATCCCGAC
GTGCCCGATC ATGTCACGCT ATGGGGCCTG CGCCTGAAAA TCTGCCAGGG CTTCGACCAG
TACGCGAACG TTCGTCCGAC GCGCATCCTG CCCGGCATCG ACGCGCCGCT GAAACGCTGC
ACCCCTGAAG ATCTGAACTG GGTGATCGTC CGCGAAAACT CCGAGGGCGA GTATTCGGGC
GTGGGCGGCC GCGTGCATCA GGGCCATCCG CTCGAAGCCG CCACCGACGT GTCGATCCTC
ACGCGCGCCG GCGTCGAACG CATCATGCGC TTCGCGTTCC GTCTCGCGCA GTCGCGTCCG
CGCAAGCTGC TGACGGTCAT CACGAAGAGC AACGCGCAAC GCCACGCGAT GGTGATGTGG
GACGAAGTCG CGCTGCAGAT TTCGAAGGAG TTTCCGGACG TCAAATGGGA CAAGGAACTC
GTCGATGCGT CGACCGCGCG CATGATCAAT CGCCCCGCTT CGCTCGACAC CATTGTTGCC
ACCAACCTGC ACGCCGACAT CCTGAGCGAC CTCGCCGCGG CGCTCGCGGG CAGCCTGGGC
ATTGCGCCGA CGGGCAACAT CGATCCGGAA CATCGCTATC CGTCGATGTT CGAACCGATT
CACGGCTCGG CGTTCGACAT CATGGGCAAG GGCCTCGCGA ACCCGATCGG CACGTTCTGG
TCGGTCGTGA TGCTGCTTGA ACATCTCGGC GAATTTGACG CCGCAAAGCG CGTGATGAGC
GCCATCGAAA CAGTGACGGC CGACACTTCG CTGCATACAG GCGACCTCGG CGGCAAGGCG
ACGACGGCGC AGGTGACGGC GGCCGTGTGC GCGCTCGTCG AGAAGACGGC CGTGGCCGCG
TAA
|
|---|
| Protein sequence | MRTYRIATIP GDGIGKEVVP AGKEALEALA RTSDAFRFEF ENFDWGADYY REHGVMMPAD
GLDAIRDKDA ILFGSAGDPD VPDHVTLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC
TPEDLNWVIV RENSEGEYSG VGGRVHQGHP LEAATDVSIL TRAGVERIMR FAFRLAQSRP
RKLLTVITKS NAQRHAMVMW DEVALQISKE FPDVKWDKEL VDASTARMIN RPASLDTIVA
TNLHADILSD LAAALAGSLG IAPTGNIDPE HRYPSMFEPI HGSAFDIMGK GLANPIGTFW
SVVMLLEHLG EFDAAKRVMS AIETVTADTS LHTGDLGGKA TTAQVTAAVC ALVEKTAVAA
|
|---|
| |