| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5643 |
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| Symbol | |
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| ID | 6247149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 121430 |
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| End bp | 122929 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597361 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_001861763 |
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| Protein GI | 186470445 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.170782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.475418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACG CGTACGACGA ACGGATCGAC GGCCCCCTTC CGTCGCATGA CAAGAGCGCG
CTGGTTGCCG AGCTTCAGCG CCTCGTGCCC GGCATGCAGC TGCTGCACGA CCGCGAAGAC
TTACGTCCAT TCGAATGCGA CGGCCTTGCC GCGTATCGCA CCACACCGAT GATGGTCGCG
CTGCCCGATT CGATCGAACA GGTTCAGGCG CTGCTGAAAT TCGCTGCCGC GCGCAACGTG
CCCGTCGTCG CGCGCGGTGC GGGAACCGGG TTGTCGGGCG GCGCGCTGCC GCTCGAACAA
GGCATTCTGC TTGTGATGGC GCGCTTCAAC CGCATTCTGC ACATCGACCC CGAAGCATCC
ATTGCACGGG TGCAGCCCGG CGTGCGCAAT CTCGCGATCT CGCAGGCGGC CGCGATTCAC
GGCCTCTACT ACGCGCCGGA TCCGTCGTCG CAGATTGCGT GTTCGATCGG CGGCAATGTC
GCCGAGAACG CGGGCGGGGT GCACTGCCTG AAATACGGTC TGACCGTGCA CAACATCCTG
AAACTCGAAG TGATGACCAT CGACGGCGAG CGCCTGACGA TCGGCTCCGA GGCGCTCGAC
TCACCCGGCT TCGACCTGCT CGCGCTGCTG ACGGGCTCCG AAGGCATGCT CGGCATCGTC
ACGGAAGTCA CCGTGAAGCT GCTGACCAGA CCGCAAAGCG CAAAGGTGCT GCTCGCCAGC
TTCGACGACG TCGAAAAAGC GGGCGCGGCC GTCGCGCAGA TCATAGGCGC GGGCGTGATT
CCCGGCGGCC TCGAAATGAT GGACAACCTC GCGATCCGCG CCGCCGAAGA CTTCATCCAC
GCGGGCTATC CCGTCGATGC GCAAGCGATT CTCCTGTGTG AACTCGACGG GGCGGAATCG
GACGTGCAGG AAGACTGCGA CCGGGTCGGC GCATTGCTGC GCGAAGCGGG CGCGACCGAC
ATTCGCATCG CGAAGGACGA AGCCGAACGT CAGCGCTTCT GGGCCGGCCG CAAGAATGCA
TTCCCTGCCG TGGGTCGCAT CTCGCCCGAT TACTACTGCA TGGACGGCAC CATTCCGCGC
CGCGAACTGG CGCGCGTGCT GCGCGGAATC GCGGCGCTGT CGAACGAATA TGGACTGCGT
GTCGCGAACG TCTTTCATGC GGGTGACGGC AACATGCACC CGCTGATCCT CTTCGATGCG
AATTCGCCCG GCGAAATGGA ACGCGCCGAA ACGCTCGGCG CGAAGATCCT CGAACTGTGC
GTCGAGGTGG GTGGCAGCAT CACGGGCGAG CACGGCGTCG GACGCGAGAA GATCAACCAG
ATGTGCGTAC AGTTCAGCAG CGAAGAGCTC AAGCTGTTCC ATTCATTGAA AGCCGCATTC
GATCCCGACG GCCTGCTCAA TCCCGGCAAG AACATTCCGA CACTCCACCG CTGCGCGGAA
TTCGGCGCGA TGCACATTCA TCGCGGCAAG CTGCCGTTTC CCGATCTGGA GCGCTTCTGA
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| Protein sequence | MSYAYDERID GPLPSHDKSA LVAELQRLVP GMQLLHDRED LRPFECDGLA AYRTTPMMVA
LPDSIEQVQA LLKFAAARNV PVVARGAGTG LSGGALPLEQ GILLVMARFN RILHIDPEAS
IARVQPGVRN LAISQAAAIH GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNIL
KLEVMTIDGE RLTIGSEALD SPGFDLLALL TGSEGMLGIV TEVTVKLLTR PQSAKVLLAS
FDDVEKAGAA VAQIIGAGVI PGGLEMMDNL AIRAAEDFIH AGYPVDAQAI LLCELDGAES
DVQEDCDRVG ALLREAGATD IRIAKDEAER QRFWAGRKNA FPAVGRISPD YYCMDGTIPR
RELARVLRGI AALSNEYGLR VANVFHAGDG NMHPLILFDA NSPGEMERAE TLGAKILELC
VEVGGSITGE HGVGREKINQ MCVQFSSEEL KLFHSLKAAF DPDGLLNPGK NIPTLHRCAE
FGAMHIHRGK LPFPDLERF
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