| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5642 |
|---|
| Symbol | glcE |
|---|
| ID | 6247148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 120363 |
|---|
| End bp | 121430 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642597360 |
|---|
| Product | glycolate oxidase FAD binding subunit |
|---|
| Protein accession | YP_001861762 |
|---|
| Protein GI | 186470444 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.835836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.589052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCG AATTCGATTC GATGGATGAC AGCGCGCGCC TCGTGGCGCA GGTTCAGCGC
GCGATCGCGG AGCACTCGCC ATTGCGCATT CGCGGCAGCA ACAGCAAACG CTTTCTGGGC
CGCGACGTGC AAGGCGAGGA ACTCGATACG CGTTCGCATC GCGGCATCGT CGCGTACGAC
CCGACCGAAC TCGTAATCAC TGCGCGCGCG GGCACGCCGC TCGTCGAACT GAATGCCGCG
CTCGACGAGG CCGATCAAAT GCTGCCGTGC GAGCCGCCGC TTTTCGACGG CCAGGGCACC
GTGGGCGGCG CAGTGGCGAC GGGACTGTCG GGACCGCGCC GTCCGTGGGC GGGCTCGATG
CGCGATTTCG TGCTCGGCTG CCGCGTGATT ACGGGCGACG GCGATCATCT GCGCTTTGGC
GGGCAGGTGA TGAAGAACGT CGCGGGCTAC GACATGTCGC GCCTGTTGGC GGGCAGTTTC
GGTTCGCTCG GCGTGTTGAC GGAAGTGTCG CTGAAAGTGC TGCCGAAGCC GCGCGAGCGC
CGCAGTTTCG CGCTCAAGCT TGGCGTGGAC GACGCGATGC GCGAGCTGTC GGCATGGCGC
AAGGCCGCGC TGCCCGTAAG CGGCGCCTGC TATATCGACG GCGAGCTGCA TGTGCGGCTC
GAGGGCGGCA GTGGCTCGGT GAACTCGGCG GTAGACCGGA TCGGCGGCGA AGAAATCGAT
TGTGCGTTCT GGCATGCATT GCGCGACCAT CGGCTGCCGT TCTTCACGGA CACGCGTCCG
CTGTGGCGTC TGTCGCTGCC GAATGCGACG CCGTCGATGA CGTTGCCCGG CGATGCGTTG
ATCGACTGGG CGGGCGCGCA GCGCTGGCTC AAGAGCGAAG CGCCTGCCGC TGAAATCCGC
CAGCTTGCGC ACGCTGTGGG CGGACATGCG ACCTGCTTCT CGCCTTCAAT CGAGCGAGAG
CCGTTCCAGC CGCTCGCCGC CCCGCTGCTG CGCTATCAGC GTCAATTGAA ACGCCGCCTC
GATCCGAATG GCGTGTTGAA TCCCGGCCGG CTCTACGCCG ATCTCTGA
|
|---|
| Protein sequence | MRREFDSMDD SARLVAQVQR AIAEHSPLRI RGSNSKRFLG RDVQGEELDT RSHRGIVAYD
PTELVITARA GTPLVELNAA LDEADQMLPC EPPLFDGQGT VGGAVATGLS GPRRPWAGSM
RDFVLGCRVI TGDGDHLRFG GQVMKNVAGY DMSRLLAGSF GSLGVLTEVS LKVLPKPRER
RSFALKLGVD DAMRELSAWR KAALPVSGAC YIDGELHVRL EGGSGSVNSA VDRIGGEEID
CAFWHALRDH RLPFFTDTRP LWRLSLPNAT PSMTLPGDAL IDWAGAQRWL KSEAPAAEIR
QLAHAVGGHA TCFSPSIERE PFQPLAAPLL RYQRQLKRRL DPNGVLNPGR LYADL
|
|---|
| |