| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5629 |
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| Symbol | |
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| ID | 6247135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 100866 |
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| End bp | 106898 |
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| Gene Length | 6033 bp |
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| Protein Length | 2010 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642597347 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001861749 |
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| Protein GI | 186470431 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.117507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGT TCGAAGTCGA GTCATCGCTG CATTCCGATG AGCAGCTTTC CCACATCGCG
GCCGCGTTGA ATGCATTGCG GCGGGGCGAC ACGTCATATC GTCTGCCCGA AAACTGGACG
GGCAAGGCGG CAGAGATTGC AAGCGAGTTC AACCAGTTGT CGTCTCAGAC GAGACACATC
GGACAGCGCC TCGGCAGGAT CTCGAGACAC CTGAGGGGCC ACGGGGAGTT GAAGAAGGAA
ATTGCCATCG AGAGCGGCGC GCTGACAGGG ATCTGGCTCG ACAGCGCATC GCACGTCAAT
CTTCTCTTCG AGAGCGTAAC GACGGCCAAC GAGTGTACGA AAACAGTCCT TGGCGCGCTA
GCGTCGCTCC AGAAAGGCGA AGCCGCGTCG TTGCCAGCGG ACTGGACGGG CATTCACGGC
AAGGTCGCAC ACGTCTTCAA CGACGTGGTC GAACAGAACG TTCGCATTGC AGAAGAACTG
GGCCGGTTGA GCAAGGTAGT CGGCAAGGAG GGGCGGCTGA AGGAACGTGC GGCGCTTCCC
TATGCTCGCG GATTCTGGGG CGATTCGATC GACGCCGTTA ACTCTTTGAT CGCGGACCTC
GTGCACCCGA CTAGCGAAGT GGCGCGCGTC ATCGGCGCAG TTGCGCAAGG AGATCTTTCG
AAGAGCATGG CGCTGGAAGC AGATGGGCGT CCATTGCAAG GCGAATTCTT TAGAACCGCC
AAGACGATCA ATACGATGGT CGAGCAACTC GGCACCTTCG CGGTCGAAGT CACGCGTGTG
GCGCGGGAGG TGGGCACGGA AGGCAAGCTC GGCGGCCAGG CGGATGTGCA GGGCGTGGCG
GGCACATGGA AGGATCTGAC CGACTCGGTC AACTCGATGG CGGGCAATCT GACGAGCCAG
GTGCGCAATA TCGCCGAAGT GACGAAAGCG GTTGCAGCGG GCGACCTGTC GAAGAAGATC
ACGGTTGACG TGAAGGGCGA AATCCTCGAA CTGAAGAACA CGATCAACAC GATGGTGGAC
CAGTTGCGCT CGTTCGCGTC GGAGGTGACG CGCGTCGCAC GCGAGGTGGG CACGGAAGGC
AAGCTCGGCG GTCAGGCGGA TGTGCAGGGG GTGGCGGGTA CATGGAAGGA TCTGACCGAC
AACGTGAACT TCATGGCGGG CAACCTGACG AGCCAGGTGC GCAACATCGC CGAAGTGACG
AAAGCGGTTG CAGCGGGCGA TCTGTCGAAG AAGATCACCG TCGACGTAAA AGGCGAAATC
CTCGAACTGA AGAACACCAT CAACACGATG GTGGATCAGT TGCGCTCGTT CGCGTCCGAA
GTGACGCGCG TCGCACGTGA GGTGGGCACG GAAGGCAAGC TGGGTGGCCA GGCGGACGTG
CAGGGCGTGG CGGGTACATG GAAGGATCTC ACCGATTCCG TGAACTCGAT GGGCGGTAAC
CTGACTGCGC AGGTGCGCAA TATCGCCGAC GTAACGACTG CTGTTGCAGC AGGCGACCTG
TCGAAGAAGA TCACTGTCGA CGTGAAGGGT GAAATCCTCG AACTGAAGAA CACGATCAAC
ACAATGGTGG ATCAGTTGCG CTCGTTCGCG TCGGAGGTGA CGCGCGTGGC GCGCGAGGTC
GGCACGGAGG GCAAGCTGGG CGGCCAGGCG GACGTGCAGG GCGTGGCGGG TACATGGAAG
GATCTGACCG ACTCCGTCAA TTCGATGGCG GGCAACCTGA CGGCGCAGGT GCGCAACATC
GCGGACGTGA CGACTGCCGT TGCTGCGGGC GACCTGTCGA AGAAGATCAC CGTCGACGTG
AAGGGCGAAA TTCGCGAACT GAAGAACACG ATCAACACGA TGGTCGATCA ACTCGGTTCG
TTTGCATCCG AGGTGACGCG GGTGGCGCGG GAGGTGGGCA CGGAAGGCAA GCTCGGCGGC
CAGGCGGATG TGCAGGGCGT GGCGGGCACA TGGAAGGATC TGACCGACTC GGTCAACTCG
ATGGCGGGCA ATCTGACGAG CCAGGTGCGC AATATCGCCG AAGTGACGAA AGCGGTTGCA
GCGGGCGACC TGTCGAAGAA GATCACGGTT GACGTGAAGG GCGAAATCCT CGAACTGAAG
AACACGATCA ACACGATGGT GGACCAGTTG CGCTCGTTCG CGTCGGAGGT GACGCGCGTC
GCACGCGAGG TGGGCACGGA AGGCAAGCTC GGCGGTCAGG CGGATGTGCA GGGGGTGGCG
GGTACATGGA AGGATCTGAC CGACAACGTG AACTTCATGG CGGGCAACCT GACGAGCCAG
GTGCGCAACA TCGCCGATGT GACGAAGGCC GTGGCCGCAG GCGATCTGTC GAAGAAGATC
ACCGTCGACG TGAAGGGCGA AATCCTCGAA CTGAAGAACA CGATCAACAC GATGGTCGAT
CAGCTTGGTT CGTTTGCATC GGAGGTAACG CGCGTCGCAC GTGAGGTGGG CACGGAAGGC
AAGCTCGGCG GTCAGGCGGA TGTGCAGGGC GTGGCGGGTA CGTGGAAGGA TCTGACCGAC
AACGTGAACT TCATGGCGGG CAACCTGACG AGCCAGGTGC GCAACATCGC CGACGTGACG
AAGGCCGTGG CAGCAGGCGA CCTGTCGAAG AAGATCACCG TCGACGTGAA GGGTGAAATC
CTCGAACTGA AGAACACGAT CAACACGATG GTGGACCAGT TGCGCTCGTT CGCGTCGGAG
GTGACGCGCG TGGCGCGCGA GGTCGGCACG GAAGGCAAGC TGGGCGGCCA GGCGTACGTG
CAGGGCGTGG CGGGTACATG GAAGGATCTG ACCGACAACG TGAACTTCAT GGCGGGCAAC
CTGACAAGCC AGGTGCGCGG TATCGCGAAG GTGGTGACAG CCGTTGCGAA CGGCGACCTG
GCGCGCAAGC TGACCGTCGA AGCCAAAGGC GAAGTGGCGG CGCTTGCGGA CACCATCAAC
AGCATGACGG AAACGCTCGC AACCTTCGCC GATCAGGTGA CCACCGTGGC ACGTGAGGTC
GGCGTGGAAG GCAAGCTCGG CGGCCAGGCG AAGGTGCCGG GCGCGTCGGG CACGTGGAAG
GGTCTGACGG AGAACGTCAA CCAGCTCGCT GCGAACCTGA CGACGCAAGT GCGCGCCATT
GCCGAAGTGG CGACGGCCGT CACGCAGGGC GACCTGACGC GCTCGATTAC CGTCGAGGCG
CTTGGCGAAG TCGCCGCGCT GAAGGATACG ATCAACGAGA TGATCCGTAA CCTCAAGGAC
ACCACGCAGG TCAACACCGA GCAGGACTGG CTGAAGACGA ACCTCGCGAA GTTCAGCCGC
ATGCTGCAGG GGCAGAAGGA TCTCGTTGCG GTCGGGCAGT TGATCCTGTC GGAGCTGGCG
CCTGTCGTCG GCGTGCAGCA GGCGGAATTC TTCGTGCTCG ACCCATCCGA ACATGCCGCG
TCACTGCGCC TGATGGCGAG CTATGCATCG AGCGGTCATT CGGCGCACGG CAAGCGTGTG
CAGATGGGCG AAGGGCTGAT CGGCCAATGC GCGGTCGAGC GGCGCAAGAT TCTGCTGGAG
CCGTCGGCCA GCGAGCCGGT CCGCATTACG TCCGGTCTGA TCAGTATCGT GCCGCACAAT
GTTCTCGTGC TGCCCGTCGT GTTCGAAGGA CAGGTAAAAG GTGTGATCGA ACTCGCGTCG
TCAGAGTGCT TCAACCCGAC ACACCTCGCG TTTCTCGATC AGCTGACGGA AAGCATCGGC
ATCGTCATCA ATACTATCGA GGCCAACACC CGCACAGAGG ATCTGCTGAA ACAGTCGCAA
TCTCTCGCGC GTGAACTGCA GAGCCGACAG GAAGAGCTGC AAACGACGAA CGAAGAACTG
CAGGAGAAAG CGCGCTTGCT GGCGCACCAG AACCAGGAAG TCGAACGCAA GAACACCGAG
GTCGAACAGG CGCGCCAGGC GCTCGAAGAA AAGGCGAAGC AGCTCGCATT GACGTCGAAG
TACAAGTCGG AGTTTCTGGC CAACATGTCT CACGAGCTTC GCACGCCGCT CAACAGCCTG
TTGATTCTCT CCGATCAACT GTGCAAGAAC TCCGAGGGCA ATCTGTCGAC AAGGCAGATC
GAGTTCTCGC GCACGATCCA TTCGTCAGGC AATGAACTGC TGATGCTGAT CAACGACATT
CTCGACCTGT CGAAGATCGA GTCGGGTACG GTTGCAATGG ATTTTGCGGA GCATCGCCTT
GCAGATTTGA CGTCATATGT GGAGCGCACG TTCCGGCACG TTGCCGAGGC ACGCAACGTC
GACTTCGTGA TCGAACTCGG CACGCACTTG CCGGCATCGA TTCGCACCGA TATCAAGCGC
CTGCAACAGA TCCTGAAGAA CCTGCTGTCG AATGCGTTCA AGTTCACGCA TCGAGGTCAC
GTCACGCTGT CGGTCGAGGA GGTGTCGGGC GGCTGGAGCG CGGACAATGA AAGACTGCAT
AGCGCGCCTG CATGCATCGC ATTCTCGGTG TCGGATACGG GCATCGGCAT TTCGGCAGAC
AAGCAGCAGA TCATCTTCGA GGCATTCCAG CAGGCCGATG GCAGCACGAG CCGGAAGTAT
GGCGGCACGG GCCTCGGCCT CGCGATCAGC CGCGAACTGT CAAAACTGCT GGGCGGCGAA
ATCCGGCTCA TCAGTTCGCC GAACAAGGGA AGCACGTTTA CGCTCTATCT TCCGCTGTCG
GCTGAAATGG GGCGCGTCGC ACGCAAGACC GTTTCTCTTT CCGGCGATGC GGCGCCCGCG
GCCGTGCTTG ATGAAGGCGT CAGCGAGTTC GATCTGCTTG CGGCGCATGA GTTCGTCGAT
ACCGTCGTGG GCGACACGCG CGAACTGGTG AGCGCCCCCG AGGACGATCG CTTCAGCATC
ATGGACGGAG ACCGTGTGCT GATGATCGTC GAAAACGATC TGGCGTTTGC GCATTTTCTT
CTCGACGCTG CACGTGAACA GGGATTCAAG GGACTCGTCA CGCCGCTCGG TGCGCCTGCG
CTGACGCTTG CCGAACAGTT CAAGCCCGAT GTCATCACGC TCGATCTGTT CCTGCCGGAC
ATGGACGGCT GGCGCGTTCT GGGCCGCCTC AAGAACGACA TGGCGACACG TCATATCCCC
GTTTGCGTGA TTTCAACGGA CGAGTCGCGA GAGCGTGCCC TCAAGGCCGG TGCGTTTGCC
TTTCTCACCA AGCCGATCCA GGCGCGTGAA ATACTGGACG ATGCATTGAG CGTGCTGGCC
GTCCATGCGA GTGCAGCGCC GCGCACGCTG CTCGTGGCGC TAGGCGATTC CCCGGCACGC
AAGGAGTTCG CTGCGTTGGT TTCCAGCGAG AGAATCGTGC CCATATTCGC GGACTCGCGC
GAACAGCTAT TGAACGCGCT CGCCGAAGGG CAAGTATCCG CTGTCGTGTT GGGCGCGGAG
ATGTTCCAGG CCTGCAGCGA CGAGATGAGC GCCGCGCTGT CGCATCGCGG TACTTTTGCA
CCCTTGCCGC TGATCGTTTT CGCACCCGGT CAGGCGGCCG GCCCGTGGAC GCGCGAAATC
GAATGCTTCA ATCCGTTCGT CGCGCCCGAC ATGAGTCGTT TGCTCGACCT GTCCGTGGCA
TGGCTGCACT GCGACGGGAA ATGGCTGCCG CAGCAGGCAC GCGACATTAT CGGCAGCCTG
CATGGCGCGA ATGAAGAGCT GACTGGACGC AAGGCGTTGA TCGTGGACGA CGACATGCGC
AACATCTTCG CACTGGCGAC CGTTCTCGAA GATCATGGGA TGAGGCACGT CTGGGCCGAC
AACGGCAGAG ATGCCATCAG GCTCGTTGAA ACCGACTCCG AAATCGACAT CGTGCTGATG
GACATCATGA TGCCGGAGAT GGATGGTCTC GTTACCACGA GTGAAATCCG CAAGCTTCCC
GTCGGTCGCA CGCTTCCCAT CATCGCGGTC ACTGCAAAGG CCATGAAGGG CGATCGGGAG
CGATGCATCG AGGCGGGTGC ATGGGACTAT CTGTCGAAGC CGGTCAACCG CGAGGATCTG
CTTGCGGTGC TACATGCGTG GCTGCATCGG TAG
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| Protein sequence | MDTFEVESSL HSDEQLSHIA AALNALRRGD TSYRLPENWT GKAAEIASEF NQLSSQTRHI
GQRLGRISRH LRGHGELKKE IAIESGALTG IWLDSASHVN LLFESVTTAN ECTKTVLGAL
ASLQKGEAAS LPADWTGIHG KVAHVFNDVV EQNVRIAEEL GRLSKVVGKE GRLKERAALP
YARGFWGDSI DAVNSLIADL VHPTSEVARV IGAVAQGDLS KSMALEADGR PLQGEFFRTA
KTINTMVEQL GTFAVEVTRV AREVGTEGKL GGQADVQGVA GTWKDLTDSV NSMAGNLTSQ
VRNIAEVTKA VAAGDLSKKI TVDVKGEILE LKNTINTMVD QLRSFASEVT RVAREVGTEG
KLGGQADVQG VAGTWKDLTD NVNFMAGNLT SQVRNIAEVT KAVAAGDLSK KITVDVKGEI
LELKNTINTM VDQLRSFASE VTRVAREVGT EGKLGGQADV QGVAGTWKDL TDSVNSMGGN
LTAQVRNIAD VTTAVAAGDL SKKITVDVKG EILELKNTIN TMVDQLRSFA SEVTRVAREV
GTEGKLGGQA DVQGVAGTWK DLTDSVNSMA GNLTAQVRNI ADVTTAVAAG DLSKKITVDV
KGEIRELKNT INTMVDQLGS FASEVTRVAR EVGTEGKLGG QADVQGVAGT WKDLTDSVNS
MAGNLTSQVR NIAEVTKAVA AGDLSKKITV DVKGEILELK NTINTMVDQL RSFASEVTRV
AREVGTEGKL GGQADVQGVA GTWKDLTDNV NFMAGNLTSQ VRNIADVTKA VAAGDLSKKI
TVDVKGEILE LKNTINTMVD QLGSFASEVT RVAREVGTEG KLGGQADVQG VAGTWKDLTD
NVNFMAGNLT SQVRNIADVT KAVAAGDLSK KITVDVKGEI LELKNTINTM VDQLRSFASE
VTRVAREVGT EGKLGGQAYV QGVAGTWKDL TDNVNFMAGN LTSQVRGIAK VVTAVANGDL
ARKLTVEAKG EVAALADTIN SMTETLATFA DQVTTVAREV GVEGKLGGQA KVPGASGTWK
GLTENVNQLA ANLTTQVRAI AEVATAVTQG DLTRSITVEA LGEVAALKDT INEMIRNLKD
TTQVNTEQDW LKTNLAKFSR MLQGQKDLVA VGQLILSELA PVVGVQQAEF FVLDPSEHAA
SLRLMASYAS SGHSAHGKRV QMGEGLIGQC AVERRKILLE PSASEPVRIT SGLISIVPHN
VLVLPVVFEG QVKGVIELAS SECFNPTHLA FLDQLTESIG IVINTIEANT RTEDLLKQSQ
SLARELQSRQ EELQTTNEEL QEKARLLAHQ NQEVERKNTE VEQARQALEE KAKQLALTSK
YKSEFLANMS HELRTPLNSL LILSDQLCKN SEGNLSTRQI EFSRTIHSSG NELLMLINDI
LDLSKIESGT VAMDFAEHRL ADLTSYVERT FRHVAEARNV DFVIELGTHL PASIRTDIKR
LQQILKNLLS NAFKFTHRGH VTLSVEEVSG GWSADNERLH SAPACIAFSV SDTGIGISAD
KQQIIFEAFQ QADGSTSRKY GGTGLGLAIS RELSKLLGGE IRLISSPNKG STFTLYLPLS
AEMGRVARKT VSLSGDAAPA AVLDEGVSEF DLLAAHEFVD TVVGDTRELV SAPEDDRFSI
MDGDRVLMIV ENDLAFAHFL LDAAREQGFK GLVTPLGAPA LTLAEQFKPD VITLDLFLPD
MDGWRVLGRL KNDMATRHIP VCVISTDESR ERALKAGAFA FLTKPIQARE ILDDALSVLA
VHASAAPRTL LVALGDSPAR KEFAALVSSE RIVPIFADSR EQLLNALAEG QVSAVVLGAE
MFQACSDEMS AALSHRGTFA PLPLIVFAPG QAAGPWTREI ECFNPFVAPD MSRLLDLSVA
WLHCDGKWLP QQARDIIGSL HGANEELTGR KALIVDDDMR NIFALATVLE DHGMRHVWAD
NGRDAIRLVE TDSEIDIVLM DIMMPEMDGL VTTSEIRKLP VGRTLPIIAV TAKAMKGDRE
RCIEAGAWDY LSKPVNREDL LAVLHAWLHR
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