| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5615 |
|---|
| Symbol | |
|---|
| ID | 6247278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 84862 |
|---|
| End bp | 86520 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642597333 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_001861735 |
|---|
| Protein GI | 186470417 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.480647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.330507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGAC TGATCAGATG GGTTGGAGCC GGTGCATTAG CAGGGTCGAT GATTGTCCCG
CTCATGACCG CGCATGCGGA GGATGGACAA AATCGAGGTA ACGACAACGA CGATCGCGCG
ATCCAACATG TGCTGCTGAT CAGTGTCGAT GGCCTGCATG AACAGGATGT GGCGCGATGC
ATCGGAGCGA ATACCTGCCC GAATATCGCG CTGCTGGCTA AGTCCGGTGT GACCTATACG
AACGCTTACA CGCCGGGCTT ATCGGATTCG TTCCCCGGTC TCGCCGCGCT GGTCACGGGA
GGATCGCCGA AGTCCGCAGG ACTCTTCTAT GACGTCTCCT ACGACCGCAC CCTGTATGCG
CCCTCGGACA CGGGTTGTAC CGGCGCGCAG GGCTGGAACG TCGTGTTCGA TGAAACGACG
GGCATCGACG CGCAAGCCGG CGGCGCGCTG ACTCATCTCG ACGGCGGCGG CGCTTTCAAT
CCGGACGCCA TTCCGCACGC AAAGCACGCT GGCAAGTGCA CGCCCGTCTA TCCCCACGAC
TACATCAAGA CGAACACCCT ATTCGAGGTC GTGAAGGAAC ACATTCGTGG CGCGCGCACT
GCGTGGGCCG ACAAGCACGC GTGGGGTTAC GACTGGCTAA ACGGACCGTC GGGCCGCGGC
GTCGACGATC TGTCGCGCAC CGAAATCAAT TCGATTAATC CGTTGACGGG CAACGACTAC
ACGGACCTGT ATACGAATAC GGAGATCTTC GATAACTTCC ACGTGGCGTC GATCATCAAC
GAAATCGATG GAAAAGACTC GACGGGCAAA CGTGATGCAC CTGTACCGAC TTTGTTCGGC
ACTAACTTCC AGACGTTGAG CGTTGCCCAA AAGGCCACTG TCGCGAAGGG CGGCGGCTAC
GTCGATACGA GCTTCACGCC CGGCACGCAA GTGGCGGCGG CGATCCGATA TGTGGACGAT
TCGATCGGCA AGATGGTCGC GGAACTGAAG GCGCGCAATC TCGCCAGCTC GACGATGGTG
ATCGTCACGG CCAAGCATGG TCAATCGCCC ACGGACCATT CGAAGCTCGT CAAGAACGGC
GATACGCTCA CGGCGCTCCT CGAATCGAAG AACTTCCTCG ATCCAAACGG TAACTTCGGT
CAGAACAACA ATGCCAAAGC ACCCAACGAC GGTACCGGTC GTGTCGGCAC GGGCCTGGTG
CAAACAGACG ACGTCGGCCT CATCTGGCTG CGCGACCCGT CGCAGCTCGC TCAAGTCGTT
GCGACGCTGA ACGCGAATCT GACTTGCGGC GCACCCGGCA TCTGCGCTGA CGGTCCGCAA
GCGTACATTC TTTCGGGCGC GCCACTCGCG TCGATGTTCG GCGATCCGTC GAATGGCCGG
ACGCCCGACA TCATCGTGCA ACCGAATCCT GGCGTCATTT ACACGTCCAG CACGAAAAAG
GATGAAGAAC ACGGCGGCAA CGCGCCCGAC GACAGTCACC TCGGGCTGAT CGTTTCATTT
CCGGACGGCC GTCATCATGG CAAGACGGTC GAACGCCGCG TGACCACGAC TCAGGTCGCG
CCGACCATTC TGCGTGCGTT GGGTGTCGCG CCCGAAGAAC TGCATTCGGT ACAGGTGGAG
GGTACGCGCG CATTGCCCGG ACTTCACACC GACGACTGA
|
|---|
| Protein sequence | MSRLIRWVGA GALAGSMIVP LMTAHAEDGQ NRGNDNDDRA IQHVLLISVD GLHEQDVARC
IGANTCPNIA LLAKSGVTYT NAYTPGLSDS FPGLAALVTG GSPKSAGLFY DVSYDRTLYA
PSDTGCTGAQ GWNVVFDETT GIDAQAGGAL THLDGGGAFN PDAIPHAKHA GKCTPVYPHD
YIKTNTLFEV VKEHIRGART AWADKHAWGY DWLNGPSGRG VDDLSRTEIN SINPLTGNDY
TDLYTNTEIF DNFHVASIIN EIDGKDSTGK RDAPVPTLFG TNFQTLSVAQ KATVAKGGGY
VDTSFTPGTQ VAAAIRYVDD SIGKMVAELK ARNLASSTMV IVTAKHGQSP TDHSKLVKNG
DTLTALLESK NFLDPNGNFG QNNNAKAPND GTGRVGTGLV QTDDVGLIWL RDPSQLAQVV
ATLNANLTCG APGICADGPQ AYILSGAPLA SMFGDPSNGR TPDIIVQPNP GVIYTSSTKK
DEEHGGNAPD DSHLGLIVSF PDGRHHGKTV ERRVTTTQVA PTILRALGVA PEELHSVQVE
GTRALPGLHT DD
|
|---|
| |