| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5555 |
|---|
| Symbol | |
|---|
| ID | 6247220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 17165 |
|---|
| End bp | 18850 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642597274 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001861677 |
|---|
| Protein GI | 186470359 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.708907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTC CAACCTTTCT TGCCGGACTG GCAAGACCCG TAACACGCGC TCCTTTTGCA
CTCGTTGCAG CCAGTCTGTT GAGTGTCTCG GTCAGCGGCC AGGCGCAGAC CGACTCGCAG
CAGACGCAAA AGCCCAATAT CCTGCTGATC GTGGGCGACG ACGTGGGCTG GGGCGATCTG
GGTGCTTACG GCGGAGGTGA GGGGCGAGGC ATTCCTGCTC CGAACCTGGA CAGGCTGGCC
GATGAAGGCA TGACTTTCTT CGACTTTTAC GGTCAGCCCA GTTGCACTCC TGGCCGCGCC
GCGCTTCAGA CCGGGCGAAA TCCTAATCGA AGCGGGATGA CAACCGTGGC GTTTCAGGGG
CAAGGAGGCG GGCTCCCGCA CGCTGAATGG ACACTGGCGT CAGTATTGAA GCTCGCACAC
TACAACACGT ATTTCACCGG CAAGTGGCAT CTCGGCGAGG CCGACTATGC GTTGCCGAAT
ACGCAGGGCT ACGACGACAT GAAGTATGTC GGCCTGTATC ACCTGAATGC GTACACGTAT
GCCGACCCGA AGTGGTTTCC GGACATGGAC CAGCAAACCC GGGACATGTT CGTCAAGGTG
ACGACAGGAA TGCTTTCAGG CAAGGCCGGC CAGAAGGCGC ATGAGGACTT CAAGGTGAAT
GGCCAATACC AGAACGAGCC CGAAAAAGGC GTTGTCGGCA TACCGTTCGT GGATGCATAC
ATCGAAAAGG CAGCACTCGA AGATATCGAC GACGCCGCGC AGCGTGGACA ACCGTTCTTC
ATCAATGTGA ACTTCATGAA AGTTCACCAG CCGAATCTTC CGCACCCGGA TTACATCGGC
AAATCGCTGT CGAAGTCCAA ATATGCGGAT TCGATCGTCG AGCTCGACGC ACGTGTCGGT
CACATCATGG ACAAGCTGCG TGAGAAAGGA CTCGACAAGA ACACCCTCGT CTTCTTCACG
ACCGACAATG GCGCATGGCA GGACGTGTAC CCTGACGCGG GATACACGCC GTTCCGAGGC
GCGAAGGGGA CCGACCGGGA AGGTGGCGCG CGGGTGCCGG CGATCGCCTG GTGGCCCGGG
AAGATCAAGC CGCATTCGAG GAACTTCGAC ATCGTCGGCG GACTCGATTG CATGGCGACA
TTTGCCGCAC TCGCAGGTGT CGATCTGCCG AAGAACGATC GCGAAGGCAA GCCGATTATT
TTCGACAGTT TCGACATGTC ACCGGTCCTG TTCGGCACCG GCAAGAGCAA GCGCAACTCG
TGGTTCTATT TCACCGAGAA CGAAATGACG CCAGGTGCTG TACGCGTCGG CCAATTCAAG
GCGGTGTTCA ATCTGCGTGG AGACGCGGGG GCGGATACCG GCGGGCTCGC TGTCGACTCA
AATCTCGGCT GGAAAGGCCC CGACAAGTAC GTTGCGACAG TTCCCCAGGT GTTCGATCTG
TACCAGGACC CGCAGGAGCG CTACGACATC TTCATGAACA ACTATACAGA GCACACGTGG
ACGCTTCCGA CGTTCGGCGC CGCAGTGAAA GAGCTGATGC AGTCGTACGT GAAATACCCT
CCGCGCAAGG CGCAAAGCGA AGCGTACTCA GGTCCGATTA CCCTCAGTCA GTACGAACGC
TTTAAATATA TCCGCGATGA ACTTCAGAAG AACGGCTTCA GCATTCCGAT GCCAAGCGGA
AACTGA
|
|---|
| Protein sequence | MQLPTFLAGL ARPVTRAPFA LVAASLLSVS VSGQAQTDSQ QTQKPNILLI VGDDVGWGDL
GAYGGGEGRG IPAPNLDRLA DEGMTFFDFY GQPSCTPGRA ALQTGRNPNR SGMTTVAFQG
QGGGLPHAEW TLASVLKLAH YNTYFTGKWH LGEADYALPN TQGYDDMKYV GLYHLNAYTY
ADPKWFPDMD QQTRDMFVKV TTGMLSGKAG QKAHEDFKVN GQYQNEPEKG VVGIPFVDAY
IEKAALEDID DAAQRGQPFF INVNFMKVHQ PNLPHPDYIG KSLSKSKYAD SIVELDARVG
HIMDKLREKG LDKNTLVFFT TDNGAWQDVY PDAGYTPFRG AKGTDREGGA RVPAIAWWPG
KIKPHSRNFD IVGGLDCMAT FAALAGVDLP KNDREGKPII FDSFDMSPVL FGTGKSKRNS
WFYFTENEMT PGAVRVGQFK AVFNLRGDAG ADTGGLAVDS NLGWKGPDKY VATVPQVFDL
YQDPQERYDI FMNNYTEHTW TLPTFGAAVK ELMQSYVKYP PRKAQSEAYS GPITLSQYER
FKYIRDELQK NGFSIPMPSG N
|
|---|
| |