Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5552 |
Symbol | |
ID | 6247217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 14145 |
End bp | 14597 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642597271 |
Product | UspA domain-containing protein |
Protein accession | YP_001861674 |
Protein GI | 186470356 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0358862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCCGA GAATTATGGT GGCTATCGAC GGTAGTGATA CATCGAAGCT CGCGTTGGAC GAGGCGATCC GAATTGCGAA AGCCGGTCCG TCGAATGTGC TAGCCGTGTT GGTATTCGAG AGCGAGGCCG AAGTCGTTGG GTACGGCGGG CTCGTTATAC CAAACAGTCA GGTAGAGGAA TTGCGTGCCA CGGCGTTGAG CATTCTTGGC GAAGCGAAGG AAACGCTCGA TCAGAACGGC GTCGCAGGCG GTGGCGAACT GATTGAAAAG CCGAGTGAGA AAATCGATAT CGCGACCCTG TTGCAGCAGC AAGCGGAACG CTGGGAAGCG AATCTCGTCG TGCTTGGAAC CCACGGTCGG CGCGGGCTTC AGCGGATGGT TATCGGCAGT GTCGCGGAGA GCTTTGTGCG CCAATCAAAT TGCCCTGTTC TGCTTGTGCG CGGAAAGGGG TAA
|
Protein sequence | MYPRIMVAID GSDTSKLALD EAIRIAKAGP SNVLAVLVFE SEAEVVGYGG LVIPNSQVEE LRATALSILG EAKETLDQNG VAGGGELIEK PSEKIDIATL LQQQAERWEA NLVVLGTHGR RGLQRMVIGS VAESFVRQSN CPVLLVRGKG
|
| |