Gene Bphy_5552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5552 
Symbol 
ID6247217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp14145 
End bp14597 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content57% 
IMG OID642597271 
ProductUspA domain-containing protein 
Protein accessionYP_001861674 
Protein GI186470356 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0358862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCGA GAATTATGGT GGCTATCGAC GGTAGTGATA CATCGAAGCT CGCGTTGGAC 
GAGGCGATCC GAATTGCGAA AGCCGGTCCG TCGAATGTGC TAGCCGTGTT GGTATTCGAG
AGCGAGGCCG AAGTCGTTGG GTACGGCGGG CTCGTTATAC CAAACAGTCA GGTAGAGGAA
TTGCGTGCCA CGGCGTTGAG CATTCTTGGC GAAGCGAAGG AAACGCTCGA TCAGAACGGC
GTCGCAGGCG GTGGCGAACT GATTGAAAAG CCGAGTGAGA AAATCGATAT CGCGACCCTG
TTGCAGCAGC AAGCGGAACG CTGGGAAGCG AATCTCGTCG TGCTTGGAAC CCACGGTCGG
CGCGGGCTTC AGCGGATGGT TATCGGCAGT GTCGCGGAGA GCTTTGTGCG CCAATCAAAT
TGCCCTGTTC TGCTTGTGCG CGGAAAGGGG TAA
 
Protein sequence
MYPRIMVAID GSDTSKLALD EAIRIAKAGP SNVLAVLVFE SEAEVVGYGG LVIPNSQVEE 
LRATALSILG EAKETLDQNG VAGGGELIEK PSEKIDIATL LQQQAERWEA NLVVLGTHGR
RGLQRMVIGS VAESFVRQSN CPVLLVRGKG