| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5550 |
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| Symbol | |
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| ID | 6247215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 11066 |
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| End bp | 12295 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597269 |
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| Product | porin |
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| Protein accession | YP_001861672 |
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| Protein GI | 186470354 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.117112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ACCGACAACG ACGCCTGATC GGTCTCGCGG CCGTCGCATC CGTTGCGACG
GCGGCTCACG CACCCGCGTT CGCACAGAAC AGCGTGACGC TGTACGGCAT CGTCGATAAC
GGTATCGGCT ATCAGTCGAG CTCGACGACG CTGGGTTCGA CGTCGGGCGG TCACTCGGCG
TTCAAGATGA TTACGGGCGT GTGGGCGGGC AGCCGCTTCG GCCTGAAGGG CGCGGAAGAT
CTGGGCGGCG GCACGAAGGC CATCTTCACG CTGGAAGAGG GCTTTAGCGC CAACAGCGGC
GCGATGTCGA CGACCAACCT GATGTTCAGC CGTCAGGCGT TCGTCGGTGT GACGAACCCG
GCGTACGGTA CGCTGACGGC GGGCCGCCAG TATGCGTCGT ACTATCAGCT GCTCTCGCCG
TACAGCCCGA CAACATGGCT CACCGGCTTC TACGGTGCGC ATCCGGGCGA CGTGGATGGT
CTCGATACGA TCTACCGCGC GAACAACACG CTGCTGTACA TGTCGCCGTC GATGTCCGGC
TTCAAGTTCA GCGGATCCTA TTCGTTTGCG GGCGTGCCTG GCAGCGTGTA TCAGGGGTCG
ACGTGGAGCA CGGCGGTGCA GTATCAGCAA GGCCCCGTCG GCCTGGCGGT CGGCTTCTCG
CGCATCAACA ACGCCACGGC GGGTGGCGGC GCCTTCAGTG CCGACTCGGC GACGTCGAAT
GCGGGAGCCC AAACGGGCGT TTCGGCCGTG ACGAACGGAT ACCGCACCGC GCAGGCGCAG
CAGCGCTTTG CGGTCGGCGC GGGCTATGCG TTCAACAGCC AGTTCGATAT CACGGCAACT
TATACGAACG TGCAGTACAT CCCGGGAGCG GGCTCCTCGT TCCACAATGA GGCGATCTGG
AACACGGGCG GCATCGTGCT GCACTGGAAG CCGGCGGCAG CATGGGACTT TGCGACTGGC
TACAGCTACA CGCGCGCGAC GAAGTCCAAC GGCATCACGA GCAGCGCGCA ATACCAGCAA
TTCAATCTCT CCGAGTACTA CTCATTGTCC AAGCGCACAG GGCTGTATGC GCTTCAGGCC
TATCAGCGCG CGAATGGACA GACGCTCGGC AATAACGGTG CAGGCAACAT CATCAATGCA
ACGGCGACAT TGGGCGATGG TTTCAACTCG ACGCCCTCGT CATCGCGCAG CATGGTTGGT
GTGGGGGTAG GGGTCGTGCA TCGGTTCTGA
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| Protein sequence | MKKNRQRRLI GLAAVASVAT AAHAPAFAQN SVTLYGIVDN GIGYQSSSTT LGSTSGGHSA
FKMITGVWAG SRFGLKGAED LGGGTKAIFT LEEGFSANSG AMSTTNLMFS RQAFVGVTNP
AYGTLTAGRQ YASYYQLLSP YSPTTWLTGF YGAHPGDVDG LDTIYRANNT LLYMSPSMSG
FKFSGSYSFA GVPGSVYQGS TWSTAVQYQQ GPVGLAVGFS RINNATAGGG AFSADSATSN
AGAQTGVSAV TNGYRTAQAQ QRFAVGAGYA FNSQFDITAT YTNVQYIPGA GSSFHNEAIW
NTGGIVLHWK PAAAWDFATG YSYTRATKSN GITSSAQYQQ FNLSEYYSLS KRTGLYALQA
YQRANGQTLG NNGAGNIINA TATLGDGFNS TPSSSRSMVG VGVGVVHRF
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