Gene Bphy_5544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5544 
Symbol 
ID6247209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp4334 
End bp5239 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID642597263 
ProductLysR family transcriptional regulator 
Protein accessionYP_001861666 
Protein GI186470348 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.899335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG ATCTCACACT CCGGCAGTTG CGCTACTTCG CGGCGGCGGC GCAAACGGGC 
AATTTTTCGA TGGCGGCCGC CAACGAACAC GTGTCGCAAT CGGCTATCAC CAACGCCGTG
CTGGCGCTGG AAAGCGGCCT CGGCACGCGG CTCTTCGAGC GCCTGCCGCA GGGCGTCGCG
CTGACGCCGG AGGGCCAGGA TTTCTACAAC CACGCACGGC GCGTGCTGGA TGCCGCGCGC
GACGCCGTGC ATAAACCGCC GTTTCGTTCG CACGATATGC GCGGGACCGT GCGCATCGCC
GCTTCCTATA CGGTGCTGGG TTACTTCCTG CCGGAACTGC TGGCGCGTTT CCGCGCGACG
TATCCGTTCA TCGAGTTCGA CCTGCGCGAC ATGGAACGCG TGGATATCGA GCGCGCCGTG
CACGATGGCG ACGTCGATAT CGGCGTGGTC TTGCTGTCGA ACATCGAAAA GCTCAGCCGG
TTCGGCAGCC AGGTGTTGAT TCGCTCACGG CGGCAGTTGT GGGTCGCGCC GTCGCATCCG
CTTGCGTTGG TGGACGCGCC GTCGTTGAAG GACATCGCTG CGCATCCGTA CATCCTGATC
ACGGTGGACG AGGGCGAGCA GTCGACGCTG CGCTACTGGA AGAAGAAAGG AATCGCGCCG
AACATCGCGT TTCGCACCAG TTCGATGGAA GCGCTGCGCG GGCTCGTGGC GCACGGCTTC
GGCGTGACTG TGCTGTCGGA TATGGTGTTT CGGCCGTGGT CGCTCGAAGG CAACCGTATC
GAAGCGCGGC CTGTGCTCGA CGCCGTGCCG CAGATGGATG CGGGCATGAT CTGGCAAAAG
GGCGCGCAGT TGAACAGCCC GGCTACGGCG CTACAGCAGT TCCTGATTCA CGCGTGCGGT
ACGTGA
 
Protein sequence
MAFDLTLRQL RYFAAAAQTG NFSMAAANEH VSQSAITNAV LALESGLGTR LFERLPQGVA 
LTPEGQDFYN HARRVLDAAR DAVHKPPFRS HDMRGTVRIA ASYTVLGYFL PELLARFRAT
YPFIEFDLRD MERVDIERAV HDGDVDIGVV LLSNIEKLSR FGSQVLIRSR RQLWVAPSHP
LALVDAPSLK DIAAHPYILI TVDEGEQSTL RYWKKKGIAP NIAFRTSSME ALRGLVAHGF
GVTVLSDMVF RPWSLEGNRI EARPVLDAVP QMDAGMIWQK GAQLNSPATA LQQFLIHACG
T