Gene Bphy_5524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5524 
Symbol 
ID6247007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2677636 
End bp2678274 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID642597243 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001861646 
Protein GI186474304 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0728137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0390592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAT CCGCTGCCGT ATTTGCCATT CTCGTCGCGT TGTTGCTTGG CGCGATGATT 
CCCGGCCCGA GTTTCGTTCT CGTCGCGCGA AACTCGATCG GCCTGTCTCG CGGCGACGGA
CTGTCAACGG CCCTGGGAAT GGGCATTGGC GGGATTTTCT TCGGCGGCAT TGCGCTGGCC
GGGCTTTATA CGCTGCTGGC CGCCGTCGAA TGGCTGTATA TCGGCCTCAA AGTAGCGGGC
GGCTTGTATC TGATCTATAT GGCGTCGAAG ATCTGGCGTG GCGCGGCACA CCCTGTGGCG
ATGGACAATT CCGGCGCAGC GCGCAGCCGC AGCGCTCGCA AGTCGTTCTG GATCGGCTTG
TCGACGCAGC TCAGCAACCC GAAGACGGCC ATCTGGTACG GCAGTATCTT CGCGGCGCTG
TTGCCGCAAC ATCCGCCAGT GTGGTGCTAT GTCGTGCTGC CGCCGTTGGT CTTCGCGGTC
GAATTCGGCT GGTACTCGGT TGTGGCGCTG TGCTTTTCGA GCCGGAAGCC GCGCGAAATC
TATTTGCGCG CGAAGATCGG GATCGACCGG ATCGCGGCAT GCGCAATCGC GGCGCTTGGG
CTGCGGCTCG TCTTTGCTGC AAATAAGGCG GGCATCTGA
 
Protein sequence
MSASAAVFAI LVALLLGAMI PGPSFVLVAR NSIGLSRGDG LSTALGMGIG GIFFGGIALA 
GLYTLLAAVE WLYIGLKVAG GLYLIYMASK IWRGAAHPVA MDNSGAARSR SARKSFWIGL
STQLSNPKTA IWYGSIFAAL LPQHPPVWCY VVLPPLVFAV EFGWYSVVAL CFSSRKPREI
YLRAKIGIDR IAACAIAALG LRLVFAANKA GI