Gene Bphy_5523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5523 
Symbol 
ID6247006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2676458 
End bp2677279 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID642597242 
Productsilent information regulator protein Sir2 
Protein accessionYP_001861645 
Protein GI186474303 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0448394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0436843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA ACGAACGTAT CAGGCGCGCC GTCTCCTGGC TGCGCGAAGC GGATGGCCTG 
CTCGTGACGG CAGGCGCAGG GATGGGCGTC GATTCGGGCT TGCCCGATTA TCGCGGCGCG
GAAGGCTTCT GGCGCGCGTA TCCGGCATTG AAGCAGCACC GCCTGACCTT TCAGGACATG
GCCAATCCAC GCGTGATGGC GCTGCATCCC CGGCTATGCT GGGGCTTCTA TGGGCACCGG
CTCGATCTCT ATCGGCGCAC CGTGCCGCAT CGGGGATTCG ACATGTTGCG CCGCTGGGCC
GAAACCATGC CGCGCGGCAT CGCTGCATTC ACCAGCAACG TCGACGGGCA GTTTCAGTCG
GCGGGGTTCG ACGCTGCGTC GGTGGCCGAA TGCCACGGCT CGATTCACGT GCTGCAATGC
TCGGAAGTCT GCCAAGACGG GCTATGGAGT GCGGACATCG TGCAGCCCGT CGTCGACGAG
TCGACCTGCG AGCTCATGAG CGAACTGCCG CGCTGCCCCC AATGCGGCGC GGTTGCGCGG
CCCAACATCC TGATGTTCGG CGACTATGAC TGGATCGCGT TGCGCACCGA GGCGCAGGAA
GCGCGTCTGC ACACATGGCT GTCGACGGTC GAGCAACTCG TCGTGATCGA GATCGGCGCT
GGCAAGGCGA TCCCGACTGT GCGGTATTTC AGCGAGCAAA ACGGCCCACG CGTGATCCGC
ATCAATCCAC GCGATTTCGG CATCGCGCCG CATCACGGCA TTGGACTGGC GCGAGGCGGG
GTCGAGGGCC TGGCGCTGCT CGATCGTGCG ATGAGGGAGT AG
 
Protein sequence
MDENERIRRA VSWLREADGL LVTAGAGMGV DSGLPDYRGA EGFWRAYPAL KQHRLTFQDM 
ANPRVMALHP RLCWGFYGHR LDLYRRTVPH RGFDMLRRWA ETMPRGIAAF TSNVDGQFQS
AGFDAASVAE CHGSIHVLQC SEVCQDGLWS ADIVQPVVDE STCELMSELP RCPQCGAVAR
PNILMFGDYD WIALRTEAQE ARLHTWLSTV EQLVVIEIGA GKAIPTVRYF SEQNGPRVIR
INPRDFGIAP HHGIGLARGG VEGLALLDRA MRE