| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5508 |
|---|
| Symbol | |
|---|
| ID | 6246992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2662918 |
|---|
| End bp | 2663769 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642597228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001861631 |
|---|
| Protein GI | 186474289 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.980211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG TGAGGACTGA AAAGAACCGG GCCAACGGCA AGCATCACGC TGGTGTGCAC
GAAGGCGCAA CGGAGTCGGG GCGTTTGAGC AGCAAGCAGT ATGAAAAAGA ACTCCGGTTG
CTGCATATCG AACTGGTGAA GCTCCAGGAA TGGGTCGTGC AAACGGGCGC GAAGGTCTGC
GTCCTGTTCG AGGGACGCGA CACCGCAGGC AAAGGCGGCA CGATCAAGGC GATCACGGAG
CGCGTCAGTC CGCGCGTGTT TCGCGTCATC GCGTTGCCGG CCCCCACCGA TCGCGAGAAG
ACGCAGATGT ACATCCAGCG CTATTTGCCG CATTTGCCCG CAGCCGGCGA GATCGTGCTG
TTCGACCGAA GCTGGTACAA CCGTGCGGGC GTCGAGCGGG TGATGGGCTT TTGCACGGAA
GAGCAGGTAG AGAACTTCTT CAAGGCCGTG CCGCTGATCG AAAACGCGAT CATCCAGTCT
GGCATCATTC TTCTGAAGTA CTGGCTCGAG GTCAGCGAAG AAGAGCAGAC GCGCCGGCTC
GAAGCGCGCA TCACCGACGA GCGCAAGGTC TGGAAGCTGA CGCCGATGGA TCTGCGTTCG
TACAGCCGCT GGTACGACTA CTCGCGTGCG CGGGACGAGA TGTTCGCGGC CACCGACACC
GATCGGGCGC CGTGGTTCGT GGTGCGATCG GACGACAAGA AGCGCGGGCG GCTGAACCTG
ATCACGCATC TGCTCGACAG CATCCCGTAC AAGTCGATGC CGCGTCCGAA GATCAAGCTG
CCCAAGCGGC AAAAGGCGGA CGGCTACCGT CAGCCCGACC GTCCGGCGAG GTACGTGCCC
GAGAAGTTCT GA
|
|---|
| Protein sequence | MAEVRTEKNR ANGKHHAGVH EGATESGRLS SKQYEKELRL LHIELVKLQE WVVQTGAKVC
VLFEGRDTAG KGGTIKAITE RVSPRVFRVI ALPAPTDREK TQMYIQRYLP HLPAAGEIVL
FDRSWYNRAG VERVMGFCTE EQVENFFKAV PLIENAIIQS GIILLKYWLE VSEEEQTRRL
EARITDERKV WKLTPMDLRS YSRWYDYSRA RDEMFAATDT DRAPWFVVRS DDKKRGRLNL
ITHLLDSIPY KSMPRPKIKL PKRQKADGYR QPDRPARYVP EKF
|
|---|
| |