| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5503 |
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| Symbol | |
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| ID | 6246987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2654475 |
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| End bp | 2655812 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642597223 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001861626 |
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| Protein GI | 186474284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00522591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTT GGCAGTCGAA TCGCGCATCT GATTTCGGCG CAGGCTTCGG TGGATCGGTT
GGAGAAGACG GGCCGGCCCA AGACGGGCCG GCCCAAAAAC GGCCGCTGGC ATCACGCTTT
GCGCTCGCGG CGGCATTGGT GTCCGCCTTG TCCCTGACCG CCTGTAAAAA AGCGCCCACC
GAACCCCCGC GCCCGACTGT CGAAGTGACG GTGGTGACGG TTGCGCAGAA GGAAACGCCC
GTCGACTTCG AGTTCACCGC GCAGACGCAG AGTTCGCGCG AAGTCGAAAT CCGCGCGCGC
GTCGACGGCT TTCTCGAGCG GCGTCTGTAC GACGAAGGCG CGCTGGTCAA GGAAGGCCAG
GTGCTGTTCG TGATAGACCG CAAGCCCTTC GAAGCCGCGC TGCAATCGGC CAGGGGCGTG
CTCGCGCAGC AGCAGGCGCG CCTGCTCGTC ACCAGACAGA ACCTCGCGCG CGTCGTGCCG
CTCGCCGCGC AGAACGCGCT GAGCAAGAAG GACCTGGACG ACGCCACCGG CAACGAGAAG
GAAGCCGAAG CCGCCGTGAT CGCCGCGCAG GGCGAGGTGC GCACGGCCGA ACTGAACCTG
AGCTACTGCA CGATCCGCTC GCCGCTCAAG GGGCTGTCGA GCTTCGCGCG CGTGCAGGAC
GGCAGCTACG TCACGCCGAC GCAATCGGGC CTGCTGACGT ACGTCTACCA GCTCGATCCG
ATGTGGGTGA ACTTCAGCAT CTCCGAGAAC GAACTGCTGC GCTACCGCGA GCAGATCGCC
AAGGGCCTGC TGCGCTTTCC CGCCGACAAC CGGTTCGACG TGACCGTGAT CCAGGCCGAC
GGCTCGGTCT ATCCGCAAAA AGGCCGTATC GATTTCACGA ACCCCGCGTT CAGCCAGCAG
ACGGGCACCT TCCTCGTGCG CGCGACCTTC GCCAATCCGG ACGGCACGCT GCGCCCGGGC
CAGTTCGTGC GCGCGAAAGT GTCGGGCGCG GTGCGCCCCA ACGCGATCCT CGTGCCGCAG
CGCGCGGTGC TGCAGGGCGC GAAGAGCCAC TTCGTGTGGG TGCTCGACCA GGACGCGAAG
CCGCATCAGC GTGTGGTCGA TGTCGGCGAC TGGCACGGCG ACGACTGGTT CGTCAACGAA
GGCCTGAAGC CGGGCGAGCG CGTGGTGGTC GACGGCGCGA TCCGCGTGTC GTCGGATGCG
CAGATCAAGG TGGTGAGCGC GCCGCCGGGC TCGGGCGCGC CCGGCACGCC CGCGGCCCCT
GCGTCGGCGC CCGCGGCGGC GGCGTCCGTG CCCGCGGCGA CCGTGGCCGG GACGCAGGCG
CGTCCGGCCA GCCCCTGA
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| Protein sequence | MASWQSNRAS DFGAGFGGSV GEDGPAQDGP AQKRPLASRF ALAAALVSAL SLTACKKAPT
EPPRPTVEVT VVTVAQKETP VDFEFTAQTQ SSREVEIRAR VDGFLERRLY DEGALVKEGQ
VLFVIDRKPF EAALQSARGV LAQQQARLLV TRQNLARVVP LAAQNALSKK DLDDATGNEK
EAEAAVIAAQ GEVRTAELNL SYCTIRSPLK GLSSFARVQD GSYVTPTQSG LLTYVYQLDP
MWVNFSISEN ELLRYREQIA KGLLRFPADN RFDVTVIQAD GSVYPQKGRI DFTNPAFSQQ
TGTFLVRATF ANPDGTLRPG QFVRAKVSGA VRPNAILVPQ RAVLQGAKSH FVWVLDQDAK
PHQRVVDVGD WHGDDWFVNE GLKPGERVVV DGAIRVSSDA QIKVVSAPPG SGAPGTPAAP
ASAPAAAASV PAATVAGTQA RPASP
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