| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5492 |
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| Symbol | |
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| ID | 6246976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2640404 |
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| End bp | 2642197 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597212 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001861615 |
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| Protein GI | 186474273 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.165409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA CAGTGGGCGA CTTCATCGTC GACAGACTAC ATCGCTGGGG CGTCAAACGC
ATATACGGCT ATCCCGGCGA CGGCATCAAC GGGGTGTTCG GCGCGCTGAA TCGCGCGGAA
GGCAAAATCG AATTCGTGCA GGCCCGGCAT GAGGAAATGG CCGCGTTCAT GGCGAGCGCA
CATGCCAAGT TCACGGGAGA ACTCGGTGTC TGCATCGCGA CTTCAGGACC GGGCGCGTCG
CACCTGATCA CGGGCCTCTA CGATGCGAGA ATGGATCACA TGCCCGTGCT GGCGATCGTC
GGCCAGCAGG CGCGCGCGGC ACTCGGTGCG CATTATCAGC AGGAACTCGA TCTCGCCGCG
ATGTTCAAGG ACGTGGCGGG CGCCTATGTG CAGCAGGCCA GCGTGCCGGC GCAGGTGCGC
CACCTCGTCG ATCGGGCGAT CCGCATTGCG CTGTCCGAAC GCCGCGTGAC GGCGCTGATC
CTTCCGAACG ACCTGCAGGA CCTCGAATTC GAACCGCCCG CTCGCAAGCA CGGCACCGCG
CACTCCGGCG TCGGCTATAC GCAGCCAACC GTCGTTCCAG CACAGGGCGA TCTGCAACGC
GCCGCGGACG TGCTCAATGC CGGGCACAAG GTCGCGATTC TCGTCGGCGC GGGCGCCTTG
AACGCGACGG ACGAAGTGAT CGCGGTGGCG AACCGGCTCG GCGCGGGCGT CGCGAAGGCG
CTGCTCGGCA AGGCCGCGTT GCCCGACGAT CTGCCCTGGG TGACGGGCTC GATCGGGCTG
CTCGGCACGA AGCCCAGTTA CGAGTTGATG ACGTCATGCG ACACACTGCT GATGATCGGC
TCCGGCTTCC CGTATTCGGA GTTCCTGCCG AAAGAAGGCG ACGCGCGAGG CGTGCAGATC
GACATCAAGG CCGACATGCT GAGTCTGCGC TATCCGATGG AAGTGAATCT GGTCGGCGAC
AGCGCCACGA CGTTGCGCGC GCTGTTGCCC CTGTTGCACG AAAAGGAAAG TCAGACATGG
CGCTCGCGCA TCGAACGCTG GACGTCGCGC TGGTGGGAAA CGCTCGACGA GCGCGCGCAT
CAGCCTGCGA GCAACGGGGT GAACCCGCAG CGCGCGTTCA CCGAGTTGTC GCCGCGTTTG
CCCGACAACG TGATCCTCAC CAGCGATTCG GGCTCGTGCG CGAACTGGTA CGCACGCGAC
CTGAAGATCC GGCGCGGCAT GATGGCGTCG CTGTCGGGCG GACTCGCATC GATGGGCGCC
GCCGTGCCCT ACGCGATTGC CGCGAAGTTC GCGCATCCGG GCCGGCCCGT GATCGCGATG
GTCGGCGACG GCGCGATGCA GATGAATAAC ATGGCTGAGC TGATCACGGT GGCGAAGTAC
TGGAAGCGAT GGGCCGATCC GCGCTGGATC TGCATGGTGC TCAACAACGA AGATCTGAAC
CAGGTGACCT GGGAGCAGCG CGTGATGGAA GGCGACCCGA AGTTCGACGC GTCGCAGAAG
GTGCCGAATG TGCCGTATCA CCGCTTCGCC GAAATGATTG GACTGACAGG CCTCTATGTG
GACGATGCGG AACAGCTGGC CGATGCGTGG GAAACCGCGC TGGCCGCGAA GCGTCCTGTC
GTGCTCGAAG TGAAGTCCGA TCCCGAAGTG CCACCGCTGC CACCTCATGT GACGCTCGCA
CAGGCACGCG CGTTTGCGCG CACGTTGATG GAGGGAGATC CGAAAGAAGG CAGCGTGATC
GCCAATACTG CGCGTCAGGT GCTCGGCTCG GTGATACCGG GCGGTAAAGA TTAA
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| Protein sequence | MAKTVGDFIV DRLHRWGVKR IYGYPGDGIN GVFGALNRAE GKIEFVQARH EEMAAFMASA
HAKFTGELGV CIATSGPGAS HLITGLYDAR MDHMPVLAIV GQQARAALGA HYQQELDLAA
MFKDVAGAYV QQASVPAQVR HLVDRAIRIA LSERRVTALI LPNDLQDLEF EPPARKHGTA
HSGVGYTQPT VVPAQGDLQR AADVLNAGHK VAILVGAGAL NATDEVIAVA NRLGAGVAKA
LLGKAALPDD LPWVTGSIGL LGTKPSYELM TSCDTLLMIG SGFPYSEFLP KEGDARGVQI
DIKADMLSLR YPMEVNLVGD SATTLRALLP LLHEKESQTW RSRIERWTSR WWETLDERAH
QPASNGVNPQ RAFTELSPRL PDNVILTSDS GSCANWYARD LKIRRGMMAS LSGGLASMGA
AVPYAIAAKF AHPGRPVIAM VGDGAMQMNN MAELITVAKY WKRWADPRWI CMVLNNEDLN
QVTWEQRVME GDPKFDASQK VPNVPYHRFA EMIGLTGLYV DDAEQLADAW ETALAAKRPV
VLEVKSDPEV PPLPPHVTLA QARAFARTLM EGDPKEGSVI ANTARQVLGS VIPGGKD
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