Gene Bphy_5479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5479 
Symbol 
ID6246963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2627720 
End bp2628448 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content59% 
IMG OID642597199 
ProductABC transporter related 
Protein accessionYP_001861602 
Protein GI186474260 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC TCAACGACGT GTCGAAGTGG TACGGACAGT TTCAGGTTTT GACAGGCTGC 
ACGACGGCGG TGAACAAGGG CGAAGTGGTC GTCGTATGCG GTCCATCCGG GTCCGGCAAG
TCGACGTTGA TCAAGACGGT AAACGGCCTG GAACCATTCC AGCAGGGCGA GATCATGGTC
GGCGGTCAAT CGGTCGGGGA CAAGGGTACC AATCTGCCGA AGCTTCGCGC GAAGGTCGGG
ATGGTGTTTC AGCATTTCGA GTTGTTTCCG CACCTGTCCA TTACGGCAAA CCTGACGCTC
CCGCAGATCA AGGTATTGGG CCGGGATCGG GACACGGCAA CCGCGAAAGG TCTCGCGTTG
CTCGACCGGG TTGGGCTGCG TGCGCATGCG GACAAGTACC CAGCCCAACT GTCGGGGGGA
CAGCAGCAGC GGGTCGCGAT TGCGCGGGCG CTGTCGATGG ATCCGATCGC GATGCTATTC
GACGAACCGA CGTCCGCGCT GGACCCCGAG ATGATTAACG AAGTGCTCGA CGTGATGATC
GAACTCGCCG AGGAAGGCAT GACTATGATG TGTGTGACGC ATGAGATGGG TTTCGCGAAG
CGGGTCGCGC ATCGGGTCCT CTTCATGGAC CAGGGGATCA TCGTTGAAGA CGCACACAAG
GACGCGTTTT TCGGCAATCC GCAGTCAGAG CGAGCGAAAG AATTTCTGAT GCGCGTGCTG
CCTCATTGA
 
Protein sequence
MIELNDVSKW YGQFQVLTGC TTAVNKGEVV VVCGPSGSGK STLIKTVNGL EPFQQGEIMV 
GGQSVGDKGT NLPKLRAKVG MVFQHFELFP HLSITANLTL PQIKVLGRDR DTATAKGLAL
LDRVGLRAHA DKYPAQLSGG QQQRVAIARA LSMDPIAMLF DEPTSALDPE MINEVLDVMI
ELAEEGMTMM CVTHEMGFAK RVAHRVLFMD QGIIVEDAHK DAFFGNPQSE RAKEFLMRVL
PH