| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5472 |
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| Symbol | |
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| ID | 6246956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2621530 |
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| End bp | 2622333 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642597192 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_001861595 |
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| Protein GI | 186474253 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.122868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0319656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACC TGCATCGCGA ACTGGCACCC ATCTCCAGCG AAGCCTGGTC GCAGATCGAA
GAAGAAGTGG CGCGCACGTT CAAGCGTTCC GTCGCCGGCC GGCGCGTGGT CGACGTCAAG
GGTCCAGGCG GCGTCGATCT GTCCGGCGTC GGCACGGGGC ACCAATCGAC CATCGCGGCG
CCCCATCACG GCGTGATCGC GAAGCTGTCC GAGGTGAAGG CGCTCGTGCA ATTGACGGTG
CCGTTCGAAC TGTCGCGCGA TGCGATCGAC GCCGTCGAAC GCGGCGCCAA CGATTCAGAC
TGGCAGGCGG CGAAAGACGC CGCGAAAGAA CTCGCCTACG CTGAAGACCG CGCGATCTTC
GACGGCTACA AGGCCGCAGG CATTGTCGGC ATCCGGGAGG GTTCGTCCAA TACGTCGCTC
GCGTTGCCCG CCGATGTCGC CGACTATCCG AATGCAATCG GCGGTGCCTT GCAGCAGTTG
CGGCTGGCCG GCGTGGACGG CCCCTACTCC GTGCTGCTCG GCGCCGATGC ATATACGGCG
CTCGGCGAGG CAAGCGATCA AGGGTATCCC GTCATCGAGC ACATCAAGCG CATCGTGAAC
GGCGAGATCA TCTGGGCGCC GGCGCTCGAA GGCGGCAGCG TGCTGTCGAT GCGCGGCGGC
GACTACGAGC TGCATCTAGG CCAGGACGTG TCGATCGGCT ACCAGAGCCA TACCGACTCG
ACAGTGCGCC TCTATCTGCG CGAGACGCTG ACCTTCCTCA TGCTGACGAG CGAAGCATCG
GTGTCGGTGG TGCCGACGGA ATAG
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| Protein sequence | MNNLHRELAP ISSEAWSQIE EEVARTFKRS VAGRRVVDVK GPGGVDLSGV GTGHQSTIAA
PHHGVIAKLS EVKALVQLTV PFELSRDAID AVERGANDSD WQAAKDAAKE LAYAEDRAIF
DGYKAAGIVG IREGSSNTSL ALPADVADYP NAIGGALQQL RLAGVDGPYS VLLGADAYTA
LGEASDQGYP VIEHIKRIVN GEIIWAPALE GGSVLSMRGG DYELHLGQDV SIGYQSHTDS
TVRLYLRETL TFLMLTSEAS VSVVPTE
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