| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5459 |
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| Symbol | |
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| ID | 6246943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2606426 |
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| End bp | 2607907 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642597179 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001861582 |
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| Protein GI | 186474240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.628466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0370061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TCCCTGCACT GAACACCGTG CGCACTGGCT GGGCATGGCT GCCCATCATG
TTCGCGTTGA ACGCCTGTAC GACCGTCGGC CCGAACTACA CGTTGCCCGA CAACGCCGCC
GTCAACGCGC CGTATGCGAA CACGACGATC GACGGTGCGG ACAAGGCGCC CGTCACGCAG
CAGGCCGTGC CGTCGAAGTG GTGGCGTCTG TACGACGATC CCGTGCTCGA TCAGCTGGTG
ACGCAAGCGC TGTCGTCGAA TACCGATCTG CGCGTCGCCG CGTCGAATCT CGCACGCTCG
CGCGCGCAAC TCGACTTCGC GAACGAACAG GGCGGCTTCT CCGGCAAGAC GTCGGCGGCC
TTCCAGCGCG CGCAGGAGTC GGCCGAGCAG TATCTGCTGA CGGAGAAGCT GCCCGTCATC
AATGAAGGCG CACTCGACCT GAGCGTGTCG TACGAAATCG ATCTGTTCGG CAAGCTGCGG
CGCGGCGTCG AGGCTGCGAA AGCCGACGAC GAAGCCATTG AAGCCGCGCT CGATCTCGCG
CGCATCACCG TGGTCGCGGA TGTCGTGCGC GCCTATGTCG AGTCGTGCTC GGCGTCGCAA
GAACTCGAGA TCGCGCAGCA ATCGCTGTCG TTGCAGAAGC AACGGGTCAA GCTCACGCAA
CGGCTGCGCG ATGCGGGTCG CGGCAACCAG CCCGACGTGA CGCGCGGCCA GACCCAGGCC
GACACGCTCG CCGCCGACAT CCCGCGCTTC GTCGCGCGGC GCCGCGCCGC GCAATACCGG
CTCGCGATGC TGCTCGCACG TGCGCCGTCC GCGCTGCCGC CTGCCGCCCT CGCCTGCAGC
AAGCTGCCGC AACTGAAGCA GCCGATCCCC GTCGGCGACG GCGCCGCGCT GCTCAGGCGC
CGGCCCGACG TGCGCCAGGC CGAGCGGCTG CTGGCGGCAT CGACGGCACG CATCGGCGTC
GCGACGGCGG CGCTATATCC GTCCGTCAGC ATCGGCGCAT CGGCGGGCTC CATCGGCGTC
GCCGAAGATC TGTTCGGTCC GGCGACGAAC CGCTGGGCGT TCGGTCCGCT CATCAGCTGG
ACTTTCCCGA TCAACGGTCA GCGCGCGCGC GTCCACGAAG CGGAGGCGGC GACGAGCGGT
GCGCTCGCGC ATTTCGACGG CGTCGTGCTG AATGCGCTGC GCGAAACGCA GACGAGCCTG
TCCACTTACG CATCGGATAC GACGCGCGCC GATGCGTTGC GCACCGCGTA CAAGTCGGCG
ATCCAGTCAG CGGATGAAAC ACACCGTCTG TATGCGGCGG GACGCGAGTC GTTCCTCTCC
GACCTCGATG CGACGCGCAC GCTCACGAGC GTCGCCGCGC AGGTGTCGGC GGCCGAAGGC
CAGGTCGCGC TCGATCAGGT GAACCTGTTC CTCGCGCTCG GTGGCGGCTG GGAAGAGGAC
AAGCCGAACG CGGACGGCAA GGTCGGATCG AAGACGGAAT AA
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| Protein sequence | MKRIPALNTV RTGWAWLPIM FALNACTTVG PNYTLPDNAA VNAPYANTTI DGADKAPVTQ
QAVPSKWWRL YDDPVLDQLV TQALSSNTDL RVAASNLARS RAQLDFANEQ GGFSGKTSAA
FQRAQESAEQ YLLTEKLPVI NEGALDLSVS YEIDLFGKLR RGVEAAKADD EAIEAALDLA
RITVVADVVR AYVESCSASQ ELEIAQQSLS LQKQRVKLTQ RLRDAGRGNQ PDVTRGQTQA
DTLAADIPRF VARRRAAQYR LAMLLARAPS ALPPAALACS KLPQLKQPIP VGDGAALLRR
RPDVRQAERL LAASTARIGV ATAALYPSVS IGASAGSIGV AEDLFGPATN RWAFGPLISW
TFPINGQRAR VHEAEAATSG ALAHFDGVVL NALRETQTSL STYASDTTRA DALRTAYKSA
IQSADETHRL YAAGRESFLS DLDATRTLTS VAAQVSAAEG QVALDQVNLF LALGGGWEED
KPNADGKVGS KTE
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