Gene Bphy_5458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5458 
Symbol 
ID6246942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2605607 
End bp2606419 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID642597178 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_001861581 
Protein GI186474239 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.306625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0166355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGG ACGACGAGTT GAAACATTTC GAATCTCACG GCGCCGCGCC GCTGCCTGAG 
GCGCTGGAAG AAGGCTTCGT GGATCACGCG GGCGCGCGCA TTGCGTGGTC GACCTACGGC
AGCGGGCAGC CGTTGGTGCT GCTGCACGGC GGCCTCGGGC ATCGCGGCAA CTGGGGGTAT
CAGGTGCCGG CGCTCGTCGG GGCGGGCTAT CGCGTGATCC TGATCGACAG CCGCGGACAC
GGCAGCAGCA CGCGCGATGC GCAACCGTAC AGCTACGAGC TGATGGCGTC CGATGTGCTT
GCCGTGCTCG ATGCGCTGCA CGTGCAACGG GCTGCGTTCA TCGGCTGGAG CGACGGCGCA
TGCACCGCGT TGATTCTCGG CCGGCATGCA CGGGAGCGCG TCGCAGGTGT GTTCTTCTTC
GCATGCAACA TGGACCCGGG CGGCGCGAAG GAATTCGTGC CGACGCCCGT GATCGACCGA
TGCTTCAGCC GGCATCGCGC GGACTATCGC GCTTTGTCCG CCACACCGGA TGACTTCGAC
GCTTTCGTCG CCGCTGTCAG CGAGATGCAG CGCACGCAGC CGGATTACTC GAAAGAAGAT
CTTGCGCAGA CGGGCGTGCG GGTCACCGTG GCGATCGGCG AACACGACGA GTTCATCCGC
CAGGAGCACG CTGCGTATCT GGCGCAAAGC ATGCCCGACG CCGAACTGAT CGTGCTGCCC
AACGTCAGCC ATTTTGCGCC GCTGCAAAGG CCGGCACTGT TCAACGGCGT GATCGCGCGG
TTCGCGGGAA CCGCCTTCGG ATCGACGAAC TGA
 
Protein sequence
MQTDDELKHF ESHGAAPLPE ALEEGFVDHA GARIAWSTYG SGQPLVLLHG GLGHRGNWGY 
QVPALVGAGY RVILIDSRGH GSSTRDAQPY SYELMASDVL AVLDALHVQR AAFIGWSDGA
CTALILGRHA RERVAGVFFF ACNMDPGGAK EFVPTPVIDR CFSRHRADYR ALSATPDDFD
AFVAAVSEMQ RTQPDYSKED LAQTGVRVTV AIGEHDEFIR QEHAAYLAQS MPDAELIVLP
NVSHFAPLQR PALFNGVIAR FAGTAFGSTN