| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5450 |
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| Symbol | |
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| ID | 6246934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2597081 |
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| End bp | 2598136 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597170 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001861573 |
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| Protein GI | 186474231 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.035034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGTT CCACTCGGGC CTTTCTGCTT GGTCCGTTGC TCAAAGGGGT GTCCCGTTCC
TTCTATCTGA CGCTGCGCAT TCTCCCCGTC GGCATGCGCG ACCCGATCGG CCTCGCGTAT
TTGCTGGCGC GTGCCGCGGA CACGATCGCC GACACCGCGC TGATTCCGCC GGAGCAGCGG
CTTGCGCTGC TGCTCGCGTT GCGCGAGCAG GTCAACGGCG CGACGGGCGA CGGCGAATTC
GCGCGGCGTC TTGCGAGCGA AGTGGCGGGG CAGCAGACGC AGTCGGATGA AAAAGTGCTG
CTCGAATCGA TCGCGCCCGC GCTCGACGTG CTTTCCCAAC TGGACGATGC CGACCGCGCT
GCCGTGCGCG AGATCGTCAC GACGCTGACG ACGGGCATGG AATTCGACTT GCGCACGTTC
CCCGACGAGG GCTCGGGGCA GATTGTTGCG CTGCGCACAT GGGATGAACT GGATCGCTAC
ACGTATCTGG TGGCAGGTTG CGTCGGCGAG TTCTGGACGA AGATGACGTA CGCGCATCTG
CCCGGCACGC TCAAGACCGG TTCCGTGACG ATGCTCGAGC GCGGCGTGCG CTTCGGCAAA
GCGCTGCAGA TGACCAACGT GCTGCGCGAT TGCGGCAAGG ATTTGCGGAT CGGCCGCTGC
TATCTGCCTT CGGTGATGCT CGATCGTTTC GGACTCACAC CGCAGATGCT GCTGGACCCG
CAGGCATCGA AGCGCGCGCA ACCGTTGATG CACGAACTCG TGCGCAAGTC GCTCGATCAT
TTCCGCGCGG CGCTCGACTA CACGCTGGCG ATTCCGCGCT TTTCGCTGCG TTTGCGGCTC
GCCTGCATGT GGCCGATCGT GATCGGGCTC GAAACACTGC TGCTGCTGGT CGATAACGCG
CATTGGCTGG AGCCGGCGAA AGTGTCGAAA GTCCAGCGGA ACCAGGTGTA TGGAATCATT
GCCCGCTCGC TGCCCGTGTC GCTGTCGGAT GCGCGGCTGC GCCACTGGGT CGATGGACTG
ATCGGCGCGA TCGAAGCGCG CATCGGCGCG CGATGA
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| Protein sequence | MSSSTRAFLL GPLLKGVSRS FYLTLRILPV GMRDPIGLAY LLARAADTIA DTALIPPEQR
LALLLALREQ VNGATGDGEF ARRLASEVAG QQTQSDEKVL LESIAPALDV LSQLDDADRA
AVREIVTTLT TGMEFDLRTF PDEGSGQIVA LRTWDELDRY TYLVAGCVGE FWTKMTYAHL
PGTLKTGSVT MLERGVRFGK ALQMTNVLRD CGKDLRIGRC YLPSVMLDRF GLTPQMLLDP
QASKRAQPLM HELVRKSLDH FRAALDYTLA IPRFSLRLRL ACMWPIVIGL ETLLLLVDNA
HWLEPAKVSK VQRNQVYGII ARSLPVSLSD ARLRHWVDGL IGAIEARIGA R
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