Gene Bphy_5439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5439 
Symbol 
ID6246923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2584105 
End bp2585109 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID642597159 
ProductLacI family transcription regulator 
Protein accessionYP_001861562 
Protein GI186474220 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.654938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0657321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCC TCAAAGATGT GGCGGAGCTG GCGGGCGTGG GGCTCTCGAC AGCCTCGCGC 
GCCATTTCGG GCAAAGGACC CGTATCGGCC GACGCAGCCG CGCGCGTGAA GGCCGCGATC
GCCGAACTGA ACTTCCGGCC GTCGTCGATT GGCCGCGCGA TGGCCACCCA GCAACTGGGC
ATCATCGGCC TTTTCGTGCC GACTTTCTTC GGCTCGTACT ACGGCACGAT TCTCAAGCAG
ACGGATCTCG AACTGCGCGC GGTGCATCGG CATGTGGTCG TGGCGACGGG CTGCGGCGAA
TCGACGCCGC GCGAGCAGGC GCTCGAGGCC GTGCGCTTTC TGATCGGGCG CGACTGCGAT
GGCGTCGTGG TGATCAGCCA CGATCTGCAT GACGAAGACC TCGATGAGCT GCATCGGATG
CACCCGAAAA TGGTGTTCCT CAACCGTGCG TTCGATGCGC TGCCCGATGC GTCGTTCTGC
CCGGACCACC GGCGCGGCGG CGAACTGGCG GCGGCGACGC TGATAGAGCA TGGGCATCGC
AAGCTGGCCG TGATCTCGGG GCCGTTCACG GCGTCGGACA ACGTCGAGCG ACTCGACGGC
TTCTTCGACG AACTCGCGCG CCACGGCATT GCACGCGACA GCGTGCCGTT GATCGAATCG
GACTTCTCGC CGGAAGGCGG CTACGCGGCG ACCTGCCAGC TGCTCGAATC GAAGGCGCCG
TTCACGGGGC TTTTCTGCGC CAACGATACG ATGGCTGTCA GCGCATTGGC GCGCTTCCAG
CAGCTCGGGA TTTCGGTGCC CGGCGATGTG TCCGTGATCG GCTACGACGA CGACTACTCG
GCCGCGTATG CGGCGCCCGC GCTGACCTCC GTGCATATCC CCACCGCGGA GCTGACCCAG
AACGCAGTGC GCTGGCTCAT CAACCAGTGC TACGGGACGA AGTGGGAGAT CTTCCGCGAG
TTTCCCGTAA CGGTGTCGAT GCGGGCCTCG GTTGCGCGCG TTTGA
 
Protein sequence
MATLKDVAEL AGVGLSTASR AISGKGPVSA DAAARVKAAI AELNFRPSSI GRAMATQQLG 
IIGLFVPTFF GSYYGTILKQ TDLELRAVHR HVVVATGCGE STPREQALEA VRFLIGRDCD
GVVVISHDLH DEDLDELHRM HPKMVFLNRA FDALPDASFC PDHRRGGELA AATLIEHGHR
KLAVISGPFT ASDNVERLDG FFDELARHGI ARDSVPLIES DFSPEGGYAA TCQLLESKAP
FTGLFCANDT MAVSALARFQ QLGISVPGDV SVIGYDDDYS AAYAAPALTS VHIPTAELTQ
NAVRWLINQC YGTKWEIFRE FPVTVSMRAS VARV