Gene Bphy_5437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5437 
Symbol 
ID6246921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2582043 
End bp2582951 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID642597157 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001861560 
Protein GI186474218 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.319412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.130178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CACTGCAGCC CGTCGCCACT GCACCGCGAA AACGTGACGC GCGCAGGAAG 
CGCTTCTCCC CGTCGCGTGT GGGCATCTAC GGTTTTCTGA TCATCGCCGC GCTGTTTTTC
CTGTTGCCGC TCTATGTGAT GCTCGTCACG TCGGTGAAGC CGATGAGCGA GATACGTCTG
GGCAACCTGC TCGCGCTGCC GATGCGCTTC ACGCTTCAAC CGTGGGGCGA TGCGTGGCAG
TCGGCCTGCA CGGGGCTCGA TTGCAACGGC ATTCGCGTGG GCTTCTGGAA CTCGGTGCGC
ATCGTCGTGC CGAGCACGGT GTTGTCCATC GTGATCGGCG CGATCAATGG CTATGCACTG
TCGTTCTGGC GGCCGCGCGG CGCCGGCGTG TTCTTCGCCG TGCTGCTGCT CGGTGCGTTC
ATTCCGTATC AGGTGATGAT CTATCCGCTG GTCCGCGTAC TCGCCGCCGC GCATCTGTTC
AGCTCGCTGC CCGGCATCGT GATCGTTCAT ACGATCTTCG GCATGCCCGT GATGACGCTG
CTGTTCCGCA ATTACTATGC AGGCATTCCG ATCGAGCTGT TCAAGGCGGC GCGCATCGAC
GGCGGCGGCT TCTGGCGCAT CTTCTTCCAG CTGATGCTGC CGATGTCGCT GCCCATCATC
GTCGTCGCGA TGATTCTGCA GGTGACGAAT ATCTGGAACG ACTACCTGCT CGGGCTCGTG
TTCGCGGGCA CGCGCAATCT GCCGATGACG GTGCAGCTCA ACAACATCAT CAACACGACG
ACGGGCGAGA AGATCTACAA CGTCAACATG GCGGCGACGA TCCTGACGTC CGTCGTGCCG
CTCGCGGTGT ATTTCATCTC GGGCCGCTGG TTCGTGCGCG GCATCGCGTC AGGCGCAGTG
AAGGGCTGA
 
Protein sequence
MSTTLQPVAT APRKRDARRK RFSPSRVGIY GFLIIAALFF LLPLYVMLVT SVKPMSEIRL 
GNLLALPMRF TLQPWGDAWQ SACTGLDCNG IRVGFWNSVR IVVPSTVLSI VIGAINGYAL
SFWRPRGAGV FFAVLLLGAF IPYQVMIYPL VRVLAAAHLF SSLPGIVIVH TIFGMPVMTL
LFRNYYAGIP IELFKAARID GGGFWRIFFQ LMLPMSLPII VVAMILQVTN IWNDYLLGLV
FAGTRNLPMT VQLNNIINTT TGEKIYNVNM AATILTSVVP LAVYFISGRW FVRGIASGAV
KG