| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5430 |
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| Symbol | |
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| ID | 6246914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2573405 |
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| End bp | 2575216 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642597150 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001861553 |
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| Protein GI | 186474211 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.406809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.544805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCC CCGGGCTCAC GTTCAAGCTC TCCGTGCTGC TCGCGCTGAT CGGCGTGCTC
GCATCGGGCA CCACGGGCTA CTACGCGTAT CGCGCGAACC GTACCATGCT CGTGCACGAA
GCGGAGCGCA GCCTGCTCAC GTCGACGGAA CTGCTTGGGC AACGTTTCAC GGTCGCGATC
AACGAGATCG CTGCCGACGC GCTTGTGCTG TCCACCTTGC CGTCGGCGGC AAGCATTGCC
GTCAGCGACG ACGGCACCTC GCCGGACGTC CCGATGCGCG AACGGCTCGC GCAGGTGTTC
GCGAGCTTCA TCGTGCAGCA TCCCGAGTAT CTGCAGGTGC GGCTCATCGC ACGCAATCAC
TATGGGCTGG AGCTGATCCG CCTCGACCGG GAGTCGGGCG GCGCGGTGCG CGTGCAGCAA
AACGCGCTTC AGGAGAAGGG CCAGTTTGCA TACGTGTTCG AGACGCTCGC GCTAAGGCCG
GGGCGGATCT ACATTTCGCC GATCGCCGTC AATCACGAAC ATGGCGCGCA TGCGGCAGAA
GGCAAGCCGA CGCTGCGGGT CGGCACGCCC GTCGCCGACG CGCGCGGCGA GGTGGTCGGC
GCGGTCGTCA TCGACGTGGA TCTGGCGAGC CTGCTGCGGC TGTCGCAAGC CGATCTGCCG
ACCGACTACC AGGTCTATCT CGCGAACGAG TGGGGCGATT TCCTCGTGCA TCCCGATCCA
TCACAGACCT TCGGTTTCGA CAATGGCCGG CGCGTGCTGA TGCAGGACAG CTTCGCGGCA
ACGAAACCGC TCTTCGAGCA GTCGACTCGG CCCGTCCTGC TGAACGGGTT GACGCAGCCG
AAAGACGCGG CAGGCCAGGT GCTCGCGTTC GTGCGCCGGC CGTTCGGCGA ATCGCAGGGC
AACCGCTTTC TCGTGATCGG TCTTGCGAAG CCGCTGCACG ATGTGCTCGT CGGCGCAAAC
ATGCTCGGCA ATCGCATTGT ACGGATGGTG CTGATCTTCA GCGCGTTTGC GATCCTGCTG
GCCATCCTGT TTGCGCGTGC GCTGACCCGT CCGCTGCATA CGCTCGCCGA CGCCGCCACG
CACTTTTTCT CCGAACACAC GATGGACGCG TTGCCCGTCA AGCGCACCGA TGAAATCGGC
GTGCTCGCGC GTGGCTTCGA TCGCATGCGC CGCGAGATCC GCGTGCAGAT GGACGCGCTG
CACAGCAAGC AGCACGAGCT CGTGCATCTC GCGAGCCACG ACGGGCTGAC GGGGCTGCCC
AACCGCATGC TGTTCATGCA GAAGCTGGAG GAAGCGATCG ACCGTGCACG CGTGACGGGC
GAGCGGCTCG CCGTGCTGTT CATCGACCTG AACCGGTTCA AGCAGATCAA CGACCAATAT
GGCCATTCCG TGGGCGATGA CGTGCTCGCG ATCGTCGCGG GCCGTCTGCG GCAGGTGCTG
CACGCGGGCG ATCTCGTCGC GCGGCTCGGC GGCGACGAAT TCATCGTGCT CGTCAAAGGT
GAGCGGTCCG CCGAAGCGGC GCCCGTGATT GCCGCGCGCA TCGTGCGCAC GATCGACGAC
GAACTGCTGA TCGGCGACCA GCCGATGGCC GTCGGCGCGA GCATCGGCAT CAGTCAGTTC
CCGTCCGACG GCGACTCGGC GGAAGCGCTG CTGCTCAACG CGGATGCCGC GATGTACGCG
GCGAAATCGG GCGGCTCGGG CGCGTGGCTG TCGTATCGCG AGCTGATCGA CATGCAGCGC
TTGCGGGCCG GGCGTGAGCG CGAAGCCGAA AAAGTCGGGC CTGCGGATGA TGGCACAGAC
GTCATTGCCT AG
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| Protein sequence | MMRPGLTFKL SVLLALIGVL ASGTTGYYAY RANRTMLVHE AERSLLTSTE LLGQRFTVAI
NEIAADALVL STLPSAASIA VSDDGTSPDV PMRERLAQVF ASFIVQHPEY LQVRLIARNH
YGLELIRLDR ESGGAVRVQQ NALQEKGQFA YVFETLALRP GRIYISPIAV NHEHGAHAAE
GKPTLRVGTP VADARGEVVG AVVIDVDLAS LLRLSQADLP TDYQVYLANE WGDFLVHPDP
SQTFGFDNGR RVLMQDSFAA TKPLFEQSTR PVLLNGLTQP KDAAGQVLAF VRRPFGESQG
NRFLVIGLAK PLHDVLVGAN MLGNRIVRMV LIFSAFAILL AILFARALTR PLHTLADAAT
HFFSEHTMDA LPVKRTDEIG VLARGFDRMR REIRVQMDAL HSKQHELVHL ASHDGLTGLP
NRMLFMQKLE EAIDRARVTG ERLAVLFIDL NRFKQINDQY GHSVGDDVLA IVAGRLRQVL
HAGDLVARLG GDEFIVLVKG ERSAEAAPVI AARIVRTIDD ELLIGDQPMA VGASIGISQF
PSDGDSAEAL LLNADAAMYA AKSGGSGAWL SYRELIDMQR LRAGREREAE KVGPADDGTD
VIA
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