Gene Bphy_5420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5420 
Symbol 
ID6246904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2563515 
End bp2564660 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID642597140 
Producthypothetical protein 
Protein accessionYP_001861543 
Protein GI186474201 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.634166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA CCATCGACAC CATCAGTCAG CTTCTGGGAT TCACGGCGGC GCAACGCGGC 
CGCGAACTGT CCGGCGCGTC GCCGCAGCAC GACGGCGAGC GCTTTCGCAA CGTCAAGCCG
CGTCCCGTCG AGGGCTTCGG CAAGACGTTG CGGATCGCGT GGAACATGTT GTTCAACAAG
CCGGCGGGCA CCATGCCGCC CGCCGAGCTG CCCGTCGATA CACTCACGCG TGCGGACCTC
GAGGCCGCGC CGGACGGCAG CCTGTTCCGG CTCGGCCATT CGACGATGCT GCTCAAGCTG
CGCGGTCAGT TCTGGCTGAC GGATCCGGTG TTCGCGGAGC GCGCGTCGCC GTTCAAGCGG
ATGGGGCCGA AGCGCTTCCA TGCGCCGCCC ATCGCACGCG AAGATTTGCC GCCGTTGCGC
GGCGTGATCC TGTCGCACGA TCACTACGAC CATCTGGACC GCGACACGGT GCTGGCTTTG
GCTGGCACGA CGGGCGTGTT CCTGACGCCG CTGGGCGTCG GCGACCGGCT GATCGAGTGG
GGCGTCGCGG CATCGAAGGT GCGTCAGTTC GACTGGTGGC AGGGCGTCGA AATCGACGGG
CTGCAGTTCA CGGCAACGCC GGCGCAGCAC TTCTCGGGGC GCAGCCTGTT CGATGGCAAC
AGCACGTTGT GGTCGTCGTG GGTGATCGTC GACGGTGACC TGCGCGTATT CTTCAGCGGC
GATACGGGCT ACTTCGACGG CTTCAAGACA ATCGGCGAGC AGCTCGGTCC GTTCGACGTG
ACCCTGCTGG AAACGGGCGC GTATGACGCG CAGTGGCCAT ACGTCCACAT GCAGCCCGAC
CATACCGTAC AGGCGCATAT CGATCTGCGC GGGCGCTGGC TCGTGCCAAT CCACAACGGC
ACGTTCGATC TGGCGATGCA TCGCTGGCAG GAACCGTTCG AGCGCGTGGT GGGGCTCGCG
GCCGCGCATG GCATCGCGCT CGCGACGCCG CGCATGGGCG AGCGGCTCGA TCTCAGCGCG
CCGCATCGCG GCGAACGCTG GTGGCGCGAG GTGCTTGACC TCGCTGAGAT TCTCGACGCC
GGCGTTGCAC CGAAGCCGGC GCGCCGCCGC GCGTCGTGCC GTCCCGCCGG GCAGGGCAAC
GGGTGA
 
Protein sequence
MKSTIDTISQ LLGFTAAQRG RELSGASPQH DGERFRNVKP RPVEGFGKTL RIAWNMLFNK 
PAGTMPPAEL PVDTLTRADL EAAPDGSLFR LGHSTMLLKL RGQFWLTDPV FAERASPFKR
MGPKRFHAPP IAREDLPPLR GVILSHDHYD HLDRDTVLAL AGTTGVFLTP LGVGDRLIEW
GVAASKVRQF DWWQGVEIDG LQFTATPAQH FSGRSLFDGN STLWSSWVIV DGDLRVFFSG
DTGYFDGFKT IGEQLGPFDV TLLETGAYDA QWPYVHMQPD HTVQAHIDLR GRWLVPIHNG
TFDLAMHRWQ EPFERVVGLA AAHGIALATP RMGERLDLSA PHRGERWWRE VLDLAEILDA
GVAPKPARRR ASCRPAGQGN G