| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5415 |
|---|
| Symbol | |
|---|
| ID | 6246899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2558542 |
|---|
| End bp | 2560107 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597135 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001861538 |
|---|
| Protein GI | 186474196 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.792379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.597511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA CGACAATGCA AAAGGCCACC CCACTCTCCG AACTCGCTGA CAACGGCATG
AAGCGCATCG AGGCGAACGG CACGCCGATC CTGCTGATCC GCCGCGGCGA TACCGTGCAT
GCGTATAGCG CGGACTGTCC GCATGCAGGC GCGCCGCTCG AACAGGGCGC GCTCTGCAAT
GGCCGGCTAG TGTGTCCGTG GCACAAGGGC ACTTTCGACA TCGCGACGGG CGCGCTCGTC
GAGCCGCCGC CGCTGCGGCC GCTGACGCGT TACCCCGTGC GGATCGAACA CGGCGACGTG
CTCGTCGACA GCACGCCGGA GCCGTCGGAA ACCCACACGA AAACGCCTGC GGACCCGCGC
ACCTTCGCGA TCGTCGGCGC GGGCGCGGCG GGCGCGGCCG CTTGCGCCGC GTTGCGCGAG
GCGGGCTTCG CAGGACGCGT CGTGCTGATC GATCGCGAGC CGCGCACGCC ATACGACCGC
ACCGTGTTGA GCAAGTTCGT GCCGTCGGGC GAGATGTCCG TCGACGAGAT ACCGCCTCTT
CTGCCCGACG ACTTCTTCAC TGCGCACGCG ATCGAAACAA TCCAGGCCCA GGTCACCGCA
CTGGATGCGG GCGCGCGCCG CATCGATATT GGCAGCGCAC CGTCGATTCG CTACGATGCC
GCGCTCATCG CCACGGGCGG CATACCCAAG CGGCTTATGT TGCCAGGCAG CGAGGCGGCC
GATATCAAGC CGCGCATCCG CCTGCTGCGC GATCGCGATG ACGCGCGGCA TCTCGTCGAC
ATGGCCGCAC AAGGCGAGCA CGCACTCGTG CTGGGCGCGA GTTTCGTCGG GATGGAAGTG
GCGTCGGCGC TGCGCGAACG CAAGCTGCGG GTGACGGTCG TGTCGCCGGG CAAGGTGCCC
TTCGAGAAGC AGTTCGGTCC TGAGCTAGGC AGGCTCTTCA TGCGGCTGCA CGAAGTGAAT
GGCGTGAGCG TCCGCATGGG CCTTCGTGCG CGCGCCGTCG CGCCCGGCGA TGCAAGCGGC
GCACTGCGCG TCACGCTCGA CCACGGCGAG ATCGTGTCAT GCGATTTCAT CGTCGCGGGC
CTCGGGGTCA CGCCTGCGAC GGATTTTCTG AAAGGCGTGA CGCGCAACGA CGATAAGAGC
GTCGACGTCG ATGCATCCAT GCGCGTGTCG GACGGTCTCT ATGCGGCAGG CGACATCGCG
CGGTTCGAAT TGCAGGCGCC CGTCAATGAA CGCGTGCGGA TCGAACACTG GCGCGTTGCG
CAACAGCATG CGCGCATCGC TGCGCATGCC ATGCTCGGCA TGCCGCCAGA AGAACCGCTC
GTGCCGTTTT TCTGGACCTA TCACTTCGGC AAGACGTTCG AATACCTCGG TCACGCGAAG
CACTGGGACA AGACGATATT CACGGGGACG CCCGATACTT TCGAGTTCAT CGCACTGCTC
GGCGACAAAG GAAATCTGGT CGCCGCCGTC GGATGCAACC GCGGCAAACA GATGGGCATG
CTGGCGGAAG CATTACGCAA ACCGTTGAGT CTTGCCGATG CGATGAAGCT TGCCGAATCG
GCATGA
|
|---|
| Protein sequence | MTNTTMQKAT PLSELADNGM KRIEANGTPI LLIRRGDTVH AYSADCPHAG APLEQGALCN
GRLVCPWHKG TFDIATGALV EPPPLRPLTR YPVRIEHGDV LVDSTPEPSE THTKTPADPR
TFAIVGAGAA GAAACAALRE AGFAGRVVLI DREPRTPYDR TVLSKFVPSG EMSVDEIPPL
LPDDFFTAHA IETIQAQVTA LDAGARRIDI GSAPSIRYDA ALIATGGIPK RLMLPGSEAA
DIKPRIRLLR DRDDARHLVD MAAQGEHALV LGASFVGMEV ASALRERKLR VTVVSPGKVP
FEKQFGPELG RLFMRLHEVN GVSVRMGLRA RAVAPGDASG ALRVTLDHGE IVSCDFIVAG
LGVTPATDFL KGVTRNDDKS VDVDASMRVS DGLYAAGDIA RFELQAPVNE RVRIEHWRVA
QQHARIAAHA MLGMPPEEPL VPFFWTYHFG KTFEYLGHAK HWDKTIFTGT PDTFEFIALL
GDKGNLVAAV GCNRGKQMGM LAEALRKPLS LADAMKLAES A
|
|---|
| |