| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5407 |
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| Symbol | |
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| ID | 6246891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2549687 |
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| End bp | 2552134 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642597127 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001861530 |
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| Protein GI | 186474188 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT TCGACAAAGA CATCGGCAGT GAGGTAGGGC GTGACGCACC GCCGCCGCAT
CTCCACGCGA CACAGAACGC CGCGACAGGC GGCATGGACG CGCACGCCGT CGATTTCAGC
AGCCAATGGC TGCAGCTGTG GGCCGAATCC ACTACCGACT ACTCGATCTA CGCACTCGCG
CCCGAAGGCA CGATCATCAG TTGGAATCTG GGCGGACACA AAATCCAGGG TTACGCACCC
GATGAGATTC TCGGCCAGCA CGTGCGCATG CTGTACACCG CGGAAGATGT GCGCGCCGGC
GTGCCGGATA TCGAGCTCGA GCGTGCGCGC GAAGACGGAC GGTATGAAAC AGAGGGCTGG
CGCGCGCGCA AGGACGGCGC GCTGTTCTGG GCTAACCTGA CCATCACGGC GCTTCATGCT
GCCGACGGCA AACTGCTCGG CTATGGGTGC GTCGTGCGCG ACATCAGCGA CAAGAAGAAC
GCTACCGACG CCGCGCTCGA AAGCGACCGG CGCTTCCGTC TGCTGGTGCA GGGCGTGAGC
GACTACGCCA TCTTCATGCT GTCGCCCGAA GGTTGCGTCA CCAACTGGAA TCCCGGCGCG
CGGCGGATCA AGGGTTATAC CGACGAGCAG ATCATCGGCT CACATTTTTC GTGTTTCTAC
ACGCCCGAAG ATGCTGCCGC GGGCGTGCCG CAGCGCGGGC TCGAGACAGC CGCGCGCGAA
GGCCGCTGGG AAGCCGAAGG TTGGCGCGTG CGGCGCGATG GCAGCCGCTT CTGGGCGCAC
GTCGTGATCG ACGCAATTCG CGACGAAGGC GGCACTCTGA TCGGCTTCGC CAAGATCACG
CGCGACATCA CCGAGCGCCG TCAGGCCGCC GAACTGCTCG ACCAGACCCG CAATGCGCTC
TTTCAGTCAC AGAAAATGGA AGCGCTCGGC AAGCTGACGG GCGGCGTCGC ACACGACTTC
AACAACGTGC TGCAAGTGCT GCGCGGCAAC CTTGAACTGC TCGGCGCGCG GCACGACGAT
GCGTGGAGCC GGTCGCGCAT CGGCCGCGCG ATCGAGGCCG TCGAGCGCGG CTCGAAGCTC
GCGTCGCACC TGCTCGCGTT CGGGCGCCAG CAGGCGTTGC AGCCCGCGGC GAGCCACCTC
GGCCACGTGC TGCACAACAT GGAAGACCTG TTGCGCCGCG CGCTCGGCGA GCGGGTGCGC
GTGCGGATTC ACGAGTCACT GGGCGGCGGC GAGTTGTGGA ACGTGATGGT CGATACGCAC
CAACTGGAAA ACGTGCTGCT CAATCTTGCG ATCAATTCGC GCGATGCAAT GCCGGAAGGC
GGCATGCTGA CGTTCGGATT GTCGAATGCC GTGCTCGACG CGAAGGCCGC CTTGACCGCG
CAGATCGAAC CCGGCGAATA CGTGAAGATG ACGGTCACCG ATACAGGCAC GGGCATGAGC
CCCGATGTCG CTGGGCGAGC CTTCGATCCG TTCTACACGA CCAAGCCGGA GGGACAGGGC
ACGGGGCTGG GCCTGAGCAT GGCGTATGGC TTCGTGCTGC AAAGCGGCGG CCATATCGAG
CTGGCCAGCA CGCCGGGCGT CGGCACCACG GTGACGATCT ATTTGCCGCG CTCGACGCAG
ACGCCCGTCG CGCGCCCCGC CGCTCCTGCC GAACCGGAAG CCGTGCATGC CCTGCGTGGC
GACGAAACGG TGCTTGTCGT CGAAGACGAC CGGCGCGTGC AATTGACCGT GGTCGACATG
CTCACGCAAC TCGGCTATAG CGTGCTCACC GCTAACGATG CAGCGGAAGC GCTGACCGTA
CTGCGCAGCG GCGCGAAGGT CGATCTGCTT TTCAGCGACG TGGTGATGCC CGGCTCGCTG
CTGAGCCCCG AAATGGCGCG CCAGGCGCTG TTGATGCGGC CGTCGTTGAA GGTGCTGTTC
ACGTCGGGGC ACACACGCGA CATGATGGGC CTCGACGAGC AGCTACGGGG CGGCGCCGAT
CTGCTGCAAA AGCCGTATAG CCGCACGCAG CTCGGCCGCA AGTTGCGCGA CATGTTCGAT
GGCGCGGGAC GGCCGGCGCA CGACACGGCG CACGACGGCG CACGGACCGG CTTGTCCCGT
ACGCTGCGCA TTCTCGTCGT CGAAGACGAA CGGGACGCAC GCGACGCGCT GTGCGAACTG
ATCGCGATGC TGGGCCATAC GTTCGAGGCC GCGGGCAGCG CGGAAGAGGC ATTGGAGCGC
TTGCAACTGC GTCCGTTCGA TGTGCTGCTC ACCGATCTCA CGCTGCCGGG CATGTCCGGC
TTCGAGCTCG CACGTGCGGC CGTCGCGCTG AGGGCGGCGC AGCGCGTGGT GTTCTCCTCG
GGGCTCGACG CGACGGTATC CGACGCTTCA CTGCCGTTCG CATGGACGGC GTTGCGCAAG
CCTTATTCGT TCGATCAACT GAAAGACGCG CTCGACTCCC AAGCGTGA
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| Protein sequence | MSDFDKDIGS EVGRDAPPPH LHATQNAATG GMDAHAVDFS SQWLQLWAES TTDYSIYALA
PEGTIISWNL GGHKIQGYAP DEILGQHVRM LYTAEDVRAG VPDIELERAR EDGRYETEGW
RARKDGALFW ANLTITALHA ADGKLLGYGC VVRDISDKKN ATDAALESDR RFRLLVQGVS
DYAIFMLSPE GCVTNWNPGA RRIKGYTDEQ IIGSHFSCFY TPEDAAAGVP QRGLETAARE
GRWEAEGWRV RRDGSRFWAH VVIDAIRDEG GTLIGFAKIT RDITERRQAA ELLDQTRNAL
FQSQKMEALG KLTGGVAHDF NNVLQVLRGN LELLGARHDD AWSRSRIGRA IEAVERGSKL
ASHLLAFGRQ QALQPAASHL GHVLHNMEDL LRRALGERVR VRIHESLGGG ELWNVMVDTH
QLENVLLNLA INSRDAMPEG GMLTFGLSNA VLDAKAALTA QIEPGEYVKM TVTDTGTGMS
PDVAGRAFDP FYTTKPEGQG TGLGLSMAYG FVLQSGGHIE LASTPGVGTT VTIYLPRSTQ
TPVARPAAPA EPEAVHALRG DETVLVVEDD RRVQLTVVDM LTQLGYSVLT ANDAAEALTV
LRSGAKVDLL FSDVVMPGSL LSPEMARQAL LMRPSLKVLF TSGHTRDMMG LDEQLRGGAD
LLQKPYSRTQ LGRKLRDMFD GAGRPAHDTA HDGARTGLSR TLRILVVEDE RDARDALCEL
IAMLGHTFEA AGSAEEALER LQLRPFDVLL TDLTLPGMSG FELARAAVAL RAAQRVVFSS
GLDATVSDAS LPFAWTALRK PYSFDQLKDA LDSQA
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