Gene Bphy_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5402 
Symbol 
ID6246887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2545636 
End bp2546451 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID642597123 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001861526 
Protein GI186474184 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.725302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.780103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA AGATTGCTTT GAGCGGTGCG GGCGGCCAGC TTGGCCGCTT CCTGCGCGCC 
GCGTTGAACG AGCGCGGCGT GAACCTGCGT TCCGCCGCGG GCGCGCGCGC ACTGGAGCCG
ATGTTCGACG GCGAAGACGT GATGCACGGC GACCTGCGCG AACCCGCTGT CGTCGACCGG
CTGATGCAGG GTGTCGACGT GCTGATCCAT ATGGCGGGCA CGAGCGTCGA GCGGCCGCTG
CCCGAAATCG TCGAGAACAA TCTGCGCGGC CTCGTCGAAG TGTATGAAGG CGCGCGGCGG
CATGGTGTGC GCCGCATCAT CTTCGCGAGC TCGAATCACG CGATCGGCAT GTACCCCGTC
GAAGACAAGC TCGCGCTGGA TTGCGCTTTC CGGCCCGATG GTTTCTACGG TCTCAGCAAG
GCATGGGGTG AGTCGCTCGC GCGCATGTAC TGGGACAAGC ATGGCATCGA GAGCGTATGC
ATCCGCATCG GCAGCTGCAT CGAAAAGCCG ACCGAGTTCC GTCATCTGAG CACGTGGCTC
GGCCATGACG ATTTCCTGCA TCTGATCGAC CGTTGCATCA ATGTGCCCGG GCTGGGTTTT
CAGGTGGTCT GGGGCGTGTC GAACAACACG CGCAGCTATT GGGACAATAC GGCGGCGGCA
CCGCTCGGTT ATCAGCCGAA ACAGAACGCG GAAGACTACG CGCACGAAAT CCTCGGCCAA
CCCAATCCGC TCGATCCCGT CGCCCAGCAT TTTCAGGGCG GCGGCTTCGT GACGATCGAC
TACACGCCGC CCGAAAAACG CAACGTGACG CGCTGA
 
Protein sequence
MTKKIALSGA GGQLGRFLRA ALNERGVNLR SAAGARALEP MFDGEDVMHG DLREPAVVDR 
LMQGVDVLIH MAGTSVERPL PEIVENNLRG LVEVYEGARR HGVRRIIFAS SNHAIGMYPV
EDKLALDCAF RPDGFYGLSK AWGESLARMY WDKHGIESVC IRIGSCIEKP TEFRHLSTWL
GHDDFLHLID RCINVPGLGF QVVWGVSNNT RSYWDNTAAA PLGYQPKQNA EDYAHEILGQ
PNPLDPVAQH FQGGGFVTID YTPPEKRNVT R