Gene Bphy_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5396 
Symbol 
ID6246881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2541121 
End bp2542035 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID642597117 
ProductLysR family transcriptional regulator 
Protein accessionYP_001861520 
Protein GI186474178 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.33113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.350527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CCCGGATCGA TAGCCTCCCG GCCCTGCTTG CCTTTTCCCG CGTCGTGTCG 
GCGGGCAGCC TGTCGGCGGC TGCGCGCGAA ATGGATCTGC CGCTGTCCGT GGTCAGCAAG
CGGCTCGCGC ACCTGGAGAA GAGCGTTGGC GTGCGGCTGA TCCAGCGCAC CACGCGCCGC
CAGACGCTCA CCGAGGAAGG CGCGCTGTTC CATGCGCGCG TGGTTCGCAT CCTCGATGAA
ATCGAGCAGG CGGAAGAACT GCTGTCGCAG CGCCGCCAGG AAGTCAGCGG CCTGTTGCGC
GTGACGGCGC CCGGCCAGCT CGGCCGCCAG AAGATCGCGC CGCTGATCGC CGATTTCCAG
CGTCTGCATC CCCAGCTCAC CGTGCAACTG GATTTGACGG ATGCCGTCGT CGATCTCGTC
GAAGGCGGGC TCGATCTCGC GATCCGCTTC GGCAGCCTCG CGGATTCGTC GCTGATTGCG
CGCGCGCTGG CGCCGAATTT CCGCGTGCTG TGCGCGTCGC CTGCGTATCT GAAACAGCAC
GGCACGCCGA AGCATCCGCA CGATCTGACG ACGCACCGCT GCATCCTGAT CGGCGACCAG
CGACGCGGCG AATGGCGCTT CGAGGGCGAC GAGAGCGTCG CCGTGCGCGT CGATGCCGCG
ATCGTCACGA ACGACGGCGA AGCCGCGCAT CTGTTCGCGC TCGCCGACGC GGGCATCGCG
GTGAAGTCGA TCTGGGACGT CGGCGACGAC ATCCTCGCCG GCAAACTGCG CCGCGTGCTG
CCCCAGCACT CGATGTCCGC CGCGCCGCTG CATGCCATTT ACCCGCACAG CCAGCATCTC
GCGCCGCGCG TGCGTGTGTT CGTCGACTAC CTGCGCGAGC GGCTCCTGCA GGCGTGGCGC
TGGGACAGGC TGTGA
 
Protein sequence
MTDTRIDSLP ALLAFSRVVS AGSLSAAARE MDLPLSVVSK RLAHLEKSVG VRLIQRTTRR 
QTLTEEGALF HARVVRILDE IEQAEELLSQ RRQEVSGLLR VTAPGQLGRQ KIAPLIADFQ
RLHPQLTVQL DLTDAVVDLV EGGLDLAIRF GSLADSSLIA RALAPNFRVL CASPAYLKQH
GTPKHPHDLT THRCILIGDQ RRGEWRFEGD ESVAVRVDAA IVTNDGEAAH LFALADAGIA
VKSIWDVGDD ILAGKLRRVL PQHSMSAAPL HAIYPHSQHL APRVRVFVDY LRERLLQAWR
WDRL