Gene Bphy_5389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5389 
Symbol 
ID6246874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2532062 
End bp2533180 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID642597110 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_001861513 
Protein GI186474171 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCG ATCAAATCGG CGCACGGGAC CAGGGAGGTT CCACATCGAC GTCGGCCGAC 
CGCGCCAATG CCGCGCTCGA AGCCGCGCGC GCCGCGCTCG AAACGGCCGC GCTGTCCGAC
ATGCCGATCA TGGTGCTGCT CGTCGACGAT CAGGCAATCG TCGCGGAAGC GGTAAGGCGC
GCGCTCGCGA ACGAGGAAGG CATCGACCTG CACTACTGCG CAAGCGCCGA CGAAGCGATC
CGCGCGGCCA CCCACACGCG TCCCACGGTC ATCCTGCAGG ATCTCGTGAT GCCCGGCATC
GACGGTCTCA CGCTGGTCAA GGCGTACCGC GCGAACACGA AGCTGCGTAA CGTGCCCATC
ATCGTGCTGT CGACCAAGGA AGAGCCGACC ATCAAGAGCG CGGCCTTCGC GGCGGGTGCG
AACGACTATC TCGTGAAACT GCCCGACCGC ATCGAACTCG TTGCGCGCAT CCGCTATCAC
TCGCGCTCTT ACGTCAACCT GCTGCAACGG GACGAGGCGT ACCGCGCGCT GCGCGAATCG
CAGCAGCAAC TGCTGGAAGC GAACCTCGAA CTGCGCAAGC TCACGCAATC CGATGGCCTG
ACGGGTCTGT CGAACCGCCG CTATCTGGAC GAGTACCTCA ACGCCGAATG GCGGCGCGGG
ATGCGTGCGC AATCGGAAGT GTCGTTGCTG ATGCTCGACG TCGACAACTT CAAGCCGTAC
AACGACACCT ACGGCCACGT CGCGGGCGAC GAAGTGCTCA AGCAGATTGC ATCGACGGTG
GAAGGCTGTC TCGGGCGGCC CGGCGATCTT GCCGCGCGTT TCGGCGGCGA GGAGTTCGCG
GTCGTGCTGC CCGGCACGGC GGCGGGCGGC ACGCGCCTGC TCGCCGAAAA GATCCGTCTC
GAAGTGGAGG CGCTGCGCAT TCCGCATGCG GGCTCGTCGT CGGGAAACTA TGTGACCGTC
AGCGTCGGCT GCGCGACGCT GGTGCCCGCC CCCGATGCGC AGATGACGAC GCTGATCGAA
ACCGCCGACC TCGCGCTCTA TCGTGCGAAG CGCGACGGGA AGAACCGTGT CGCGGCGATG
GAGGGAGGCA GGAGCGGGAC ACGGGGGACC GCGGAGTGA
 
Protein sequence
MDFDQIGARD QGGSTSTSAD RANAALEAAR AALETAALSD MPIMVLLVDD QAIVAEAVRR 
ALANEEGIDL HYCASADEAI RAATHTRPTV ILQDLVMPGI DGLTLVKAYR ANTKLRNVPI
IVLSTKEEPT IKSAAFAAGA NDYLVKLPDR IELVARIRYH SRSYVNLLQR DEAYRALRES
QQQLLEANLE LRKLTQSDGL TGLSNRRYLD EYLNAEWRRG MRAQSEVSLL MLDVDNFKPY
NDTYGHVAGD EVLKQIASTV EGCLGRPGDL AARFGGEEFA VVLPGTAAGG TRLLAEKIRL
EVEALRIPHA GSSSGNYVTV SVGCATLVPA PDAQMTTLIE TADLALYRAK RDGKNRVAAM
EGGRSGTRGT AE