Gene Bphy_5379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5379 
Symbol 
ID6246864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2520687 
End bp2521391 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID642597100 
ProductGntR domain-containing protein 
Protein accessionYP_001861503 
Protein GI186474161 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.791423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.648453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC AGACGCGGGA GCGGGGCAGG GTGGAGGGCA TCATGCGCCA GATGGAAACG 
TCGCTGCTCG ACGGCACGTG GCCGCCGGGC TCACGGCTGC CCGCCGAGCG CACGCTGGCC
GATCAGTACG GCGTGTCGCG CAACACGGTG CGCGAGGCGA GCCAGCGGCT GGCGGCGCGC
GGCCTGCTGC AAAGCCGGCG CGGCGCGGGC GTGTACGCGA CAGATCAGTT GCGCGCGGGC
ATCGCGTCGC CGTGGGGCCA ACTGGTCGCG GACCACCCGG TGTTGCGCAA CGACATTCTC
GAGTTTCGCC GCGTGCTGGA AGGCGCGACG GCGTATTTCG CCGCGATGCG TGCGACGGGA
GCGGATATCA AACGCATCCG TTCGCTGATG CGCGAACTGG AGCGCTCGCA CGATTGCGAC
GACAAGGACA GCGAAGCCAC GGCCGACACG CAACTGCACG ACGCAATCGC ACAGGCTTCG
CACAACACGA TGTTTCTGCA TCTGCATACG AGCATTCTCG GCATGCTGCG CGAACACATC
ACGATCAGTG GCACGGATGT GCGGGCGCTG GGCGCGGAGG AGTCGGCCCA GCTGTTGATC
CAGCATCGCG CCGTGTGCGA TGCGATCTGT ATGCGCCGGC CCGAAGAAGC GCGCACGGCG
ATGCACACGC ATATCGACTA CGTGCGCACC AACCTTCACG AGTAG
 
Protein sequence
MTTQTRERGR VEGIMRQMET SLLDGTWPPG SRLPAERTLA DQYGVSRNTV REASQRLAAR 
GLLQSRRGAG VYATDQLRAG IASPWGQLVA DHPVLRNDIL EFRRVLEGAT AYFAAMRATG
ADIKRIRSLM RELERSHDCD DKDSEATADT QLHDAIAQAS HNTMFLHLHT SILGMLREHI
TISGTDVRAL GAEESAQLLI QHRAVCDAIC MRRPEEARTA MHTHIDYVRT NLHE