Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5379 |
Symbol | |
ID | 6246864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2520687 |
End bp | 2521391 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642597100 |
Product | GntR domain-containing protein |
Protein accession | YP_001861503 |
Protein GI | 186474161 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.791423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.648453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACGC AGACGCGGGA GCGGGGCAGG GTGGAGGGCA TCATGCGCCA GATGGAAACG TCGCTGCTCG ACGGCACGTG GCCGCCGGGC TCACGGCTGC CCGCCGAGCG CACGCTGGCC GATCAGTACG GCGTGTCGCG CAACACGGTG CGCGAGGCGA GCCAGCGGCT GGCGGCGCGC GGCCTGCTGC AAAGCCGGCG CGGCGCGGGC GTGTACGCGA CAGATCAGTT GCGCGCGGGC ATCGCGTCGC CGTGGGGCCA ACTGGTCGCG GACCACCCGG TGTTGCGCAA CGACATTCTC GAGTTTCGCC GCGTGCTGGA AGGCGCGACG GCGTATTTCG CCGCGATGCG TGCGACGGGA GCGGATATCA AACGCATCCG TTCGCTGATG CGCGAACTGG AGCGCTCGCA CGATTGCGAC GACAAGGACA GCGAAGCCAC GGCCGACACG CAACTGCACG ACGCAATCGC ACAGGCTTCG CACAACACGA TGTTTCTGCA TCTGCATACG AGCATTCTCG GCATGCTGCG CGAACACATC ACGATCAGTG GCACGGATGT GCGGGCGCTG GGCGCGGAGG AGTCGGCCCA GCTGTTGATC CAGCATCGCG CCGTGTGCGA TGCGATCTGT ATGCGCCGGC CCGAAGAAGC GCGCACGGCG ATGCACACGC ATATCGACTA CGTGCGCACC AACCTTCACG AGTAG
|
Protein sequence | MTTQTRERGR VEGIMRQMET SLLDGTWPPG SRLPAERTLA DQYGVSRNTV REASQRLAAR GLLQSRRGAG VYATDQLRAG IASPWGQLVA DHPVLRNDIL EFRRVLEGAT AYFAAMRATG ADIKRIRSLM RELERSHDCD DKDSEATADT QLHDAIAQAS HNTMFLHLHT SILGMLREHI TISGTDVRAL GAEESAQLLI QHRAVCDAIC MRRPEEARTA MHTHIDYVRT NLHE
|
| |