Gene Bphy_5354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5354 
Symbol 
ID6246839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2494487 
End bp2495881 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID642597075 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001861478 
Protein GI186474136 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.624928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC TTCATATCGA TGTCGCAGTG ATTGGCGCAG GCAGCGCAGG TCTGCCCGCG 
TTCCGCGCGG CGAAGGCGGC GGCCGCGCGT GCCGTGCTGA TCGAGGGCGG CGCGTACGGG
ACGACCTGTG CGCGCGTCGG CTGTATGCCG TCGAAGCTGC TGATCGCGGC CGCGGAGGCC
GCGCATGCGG CGCGCAGCAC GGCGCCGTTC GGCGTGCACG TCGACGGCGC CGTGCGGATC
GACGGACGCG AGGTGATGGC GCGCGTCAAG CGCGAGCGCG ACCGCTTTGT CGGCTTCGTC
GTCGAATCGA CGCAAAGCGT GCCCGACGAA GAGCGGCTGA TCGGCTACGC GCAGTTCATC
GACGACAACG TGCTGCAAGT GGGGGACCAT ACGCGCGTCC ATGCGAAGAG CGTGGTGATC
GCCACGGGTT CGTCGCCGTA TGTGCCCGCG ATGTATCAGG CGCTCGGCGA CCGCGCGATC
GTCAACGACG ACGTGTTCGC GTGGGACGAC CTGCCGCGCA AGGTCGCCGT GGTCGGCGCT
GGCGTGATCG GGCTGGAACT GGGTCAGGCG CTGGCGTGGC TCGGCGTCGA CGTGACGATG
CTCGGCGCAC GCGGTCGGGT CGGTCCGTTG AGCGATCCTG CCATCAAGGG TTACGCGCGC
CATGTGTTCA GCGACGTGTT CCACTTCGAG CCGGATGCGC ACGTCGAAGC GGCGACGCGC
GAAGGAGACA GCGTGCATCT GCGCTATCGC GACGGCGCGG GCGAACTGCG TGAGGACACG
TTCGACTATG TGCTGGTCAC GGCAGGCCGC CGTCCGAACC TGGATAAGCT CGCGCTGCAC
AACACGACGC TCCAACTCGA TGCGCGCGGG GTGCCCGTGT TCGATCCGCT GACACTGCAG
GCAGGTCGGC ATCCCGTGTT CATGGCGGGC GATGCGAACG ACGTTCTCCC GCTGTTGCAC
GAAGCCGCCG ACGAAGGCCG CTCGGCCGGC GAGAACGCGG CGCGTTTTCC CGATGTCAAG
CCGCTGCTAC GCCGCGCACC GATCTCGGTG GTGTTTTCGG AGCCTGGCAT GGCGATGGTC
GGCGCCCGCC ATGCAGACCT CGCAGCGGGA GCGTTCGTGA CGGGTGAAGT GAGCTTCGAA
GATCAGGGCC GCAGCCGCGT GATGCTGCGC AATCGCGGAC TGATGCATGT GTATGCCGAC
AAGGCGACAC GCCGCTTCCT GGGCGCCGAG TGGATCGGAC CGGACGCCGA GCACATCGCG
CATCTGCTCG CTTGGGCGCT GCAGATGAAC CTCACGGTCG ACGCGATGCT GGCGATGCCG
TTCTATCATC CCGTCGTCGA AGAAGGCTTG CGTACGGCAT TGCGCGATGC CGCAGCGCAA
TTGCCGAAGG CGTGA
 
Protein sequence
MKTLHIDVAV IGAGSAGLPA FRAAKAAAAR AVLIEGGAYG TTCARVGCMP SKLLIAAAEA 
AHAARSTAPF GVHVDGAVRI DGREVMARVK RERDRFVGFV VESTQSVPDE ERLIGYAQFI
DDNVLQVGDH TRVHAKSVVI ATGSSPYVPA MYQALGDRAI VNDDVFAWDD LPRKVAVVGA
GVIGLELGQA LAWLGVDVTM LGARGRVGPL SDPAIKGYAR HVFSDVFHFE PDAHVEAATR
EGDSVHLRYR DGAGELREDT FDYVLVTAGR RPNLDKLALH NTTLQLDARG VPVFDPLTLQ
AGRHPVFMAG DANDVLPLLH EAADEGRSAG ENAARFPDVK PLLRRAPISV VFSEPGMAMV
GARHADLAAG AFVTGEVSFE DQGRSRVMLR NRGLMHVYAD KATRRFLGAE WIGPDAEHIA
HLLAWALQMN LTVDAMLAMP FYHPVVEEGL RTALRDAAAQ LPKA