| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5349 |
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| Symbol | benD |
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| ID | 6246834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2489638 |
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| End bp | 2490417 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597070 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001861473 |
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| Protein GI | 186474131 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.571723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.150503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC GCTTCAAAGG AAAAGTCGTC GTCGTGACGG GCGCGGCGCA AGGCATCGGA
CGGGGCGTCG CACTGACGGC CGCGCGAGAA GGTGCAACCG TCGTGCTGTG CGACCGTTCG
GATTTCGTGC ATGAAGTCGC GGCAGACATT TCCGCGCCGG GCGCACGCTG CATCGCCGTG
ATCGCCGATC TGGAAACGTA TGCCGGCGCG TGCAAGCTGG CGGAAGCCGC ACTCGGTGCA
TTTGGCCGCA TCGACGTGCT GATCAACAAC GTAGGCGGCA CGATCTGGGC GAAGCCGTAT
CAGCAGTATG AAGAAGCGCA GATCGAAGCT GAAGTGCGCC GCTCGCTGTT TCCGACGCTA
TGGTGCTGCC GCGCTGTGCT GCCTTCGATG ATCGAAAGGC AGGCGGGTGT GATCGTCAAT
GTGTCGTCGA TTGCGACGCG CAGCATCTAC CGGGTGCCCT ATGCGGCGTC GAAAGGCGGC
GTGAATGCGT TGACGGCCAG TCTCGCGTTC GAACACGCCG CCGACGGCAT CCGCGTCAAC
GCCGTCGCCA CGGGCGGTAC GGAAGCGCCG CCGCGACGCG TGCCGCGCAA CGCACAACAG
CAGACCGAAC AGGAAGCGAT CTGGTATCAG GGCATCGTCG ACCAGACCAA GGCGAGCAGC
CTGATGCATC GTTACGGCAC GATCGAGGAA CAGGTCGGCG CGATCCTCTT TCTCGCTTCG
GACGACGCGT CATACATTAC GGGCACCGTG TTGCCCGTGG GCGGCGGCGA TCAGGGCTGA
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| Protein sequence | MNQRFKGKVV VVTGAAQGIG RGVALTAARE GATVVLCDRS DFVHEVAADI SAPGARCIAV
IADLETYAGA CKLAEAALGA FGRIDVLINN VGGTIWAKPY QQYEEAQIEA EVRRSLFPTL
WCCRAVLPSM IERQAGVIVN VSSIATRSIY RVPYAASKGG VNALTASLAF EHAADGIRVN
AVATGGTEAP PRRVPRNAQQ QTEQEAIWYQ GIVDQTKASS LMHRYGTIEE QVGAILFLAS
DDASYITGTV LPVGGGDQG
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