Gene Bphy_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5342 
Symbol 
ID6246827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2480400 
End bp2481368 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID642597063 
Producthypothetical protein 
Protein accessionYP_001861466 
Protein GI186474124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.845934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0316774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTG TAGAGTACTC ACTGCCTTCC CATCGTTACG CCAGATGCAT CGAAGTGTCC 
AAGCGGATCC GCTGGGACAT CGACCACGAC GTGATCCGCG GCCGCACATT CGACATCAAT
CAGAAGTTCC TGCCCGACGG CCTTTCGCAG GTCTACCGGC TGCCGTTTCT TAACGAGGCC
GAACGCCGCT TCTATTCGCA GGTTCAAGGC CGCACGTATG CCAACATGTT CAAACTCGTC
GAACGTTTCA TCGGTGCGAA GATGCTTGAA CTGGGACGCG ATCACGCGCT GGGCGACCAG
ATCGCACTCG AAGCCGTCGT GCGGCTCACC GACGAAGAAC TGAAGCATCA GGAACTGTTC
CGCCGCATCG AACTGCTCGC GGGCGCCGAC ATGCCGGCCG GCTATCGCTT CCTGCCCGAT
GCCGACGATA TCGCCGCGTT CGTGCTGGGC AAATCGACGT GGTCGATTCT CGCGCTGACG
TGTTTCATCG AAATCTTTTC GCAGGTGCAT TACCGTCAGA GCATCGAGGC GGACGACACG
CTCTCGCCGC TCTTCAAGGA CGTGTTCATG TACCACTGGA AAGAAGAGTC GCAACACGCG
ATCATCGACG AACTCGAATG GATGCGCGAG GACGCAAAGG TCGGCAAGCG CGAGCGCGAT
GCGGCCGTCG ACGACCTGAT CGCGCTGGTG GCGGGCGTCG ACGGCGTGGT GCAGACGCAG
GCAAAGGAGG ATGCCAGGTA CTTCCTCGAT CACGTGGGCC GCACGCTGCT GCCCGAGGAC
GTCGCCCAGG TGCAGGCAGC CATGCTCGAT GCGTATCGCT GGCAGTACAT CGTGTCGGGC
GTCGAAGAGC CGCGCTTCCG GTCGCTGCTC ACAAGCGTGA TCGACGACGA GCAAGGCGCG
CGCATCTTCG CTGCGCTGGC GCCGATCATG ACGCCGACCC TGAACCGGCC GACGCTGCCG
CTCGCCTGA
 
Protein sequence
MQAVEYSLPS HRYARCIEVS KRIRWDIDHD VIRGRTFDIN QKFLPDGLSQ VYRLPFLNEA 
ERRFYSQVQG RTYANMFKLV ERFIGAKMLE LGRDHALGDQ IALEAVVRLT DEELKHQELF
RRIELLAGAD MPAGYRFLPD ADDIAAFVLG KSTWSILALT CFIEIFSQVH YRQSIEADDT
LSPLFKDVFM YHWKEESQHA IIDELEWMRE DAKVGKRERD AAVDDLIALV AGVDGVVQTQ
AKEDARYFLD HVGRTLLPED VAQVQAAMLD AYRWQYIVSG VEEPRFRSLL TSVIDDEQGA
RIFAALAPIM TPTLNRPTLP LA