| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5326 |
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| Symbol | |
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| ID | 6246811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2464279 |
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| End bp | 2465250 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642597047 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001861450 |
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| Protein GI | 186474108 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0355396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG AACAGATTCT CTTGCTGACC GCGATGTTCG CGATCGTGTT CGGCGCGGCA
TGGAAGGCGA TGTCGCTGCT GCGTCCCGAT CCGCTGAAGC GCCGTATCGA CGGCATCGCG
GCTGCATCTT CGGGCGTCGC CGGCATGGAG GGCGAGCCGG GTGTCGCGGA GGACGAAAGC
CCCGCATGGA TGGAAACGGT CGCCAAAGTG TCGCATCACG TCGCGCGGCT GTCACTGCCG
AAAGACGACT GGGACAAGTC GGCATTGCGG CGCCGCTTTG CGAATGCGGG TTTGCGCAGC
GACAGCGCGC CCGCGCTCTA CTTCGCCGCA AAGACGCTGC TCGCGCTTGT GCTGCCCGCG
CTCGCGCTGG TCAGCATCAC GCTGCTGGCG GGCGCGGACG GGGACAAGTT GCTGCTGGTG
GCGGCGCTCG CGATGGCCGC GCTCGGCTTT TATCTGCCGA ACGTGGTGCT GAGCCGTCTG
GTCGAGGCCC GCCAGCGCAC GATCTTCGAA GACCTGCCCG ACGCGCTCGA TCTGATGACC
GTGTGCGTCG AAGCGGGCCT CGGACTGGAT GCGGCCATGC AGCGCGTCGC CGAAGAGATC
GGCGTGAAGA GCCGCGCGCT CAAGGACGAA CTCGAACTTG TGCTGCTCGA GTTGCGGGCG
GGTTCGGCGC GCGACAAGGC GCTGCGCAAT CTCGCACTGC GCACGGGCGT CGAAGACATC
GACACGCTCA CGTCGATGCT GATCCAGGCG GATCGTTTCG GCACGAGCGT CGGCGATTCG
CTGCGGGTGT TCATCGACGC GCTGCGCACC AGGCGCCGTC TGCGCGCCGA GGAACAGGCG
GCGAAGATCG CGCTGAAGCT GCTTTTTCCG CTGATGTTCT GCATCTTCCC GACGCTGATC
GTCGTGCTGA TCGGGCCTGC CGCGATGCGA GTCGCGCACC AGCTGCTGCC GACCATGAGC
GGTATGCACT GA
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| Protein sequence | MQTEQILLLT AMFAIVFGAA WKAMSLLRPD PLKRRIDGIA AASSGVAGME GEPGVAEDES
PAWMETVAKV SHHVARLSLP KDDWDKSALR RRFANAGLRS DSAPALYFAA KTLLALVLPA
LALVSITLLA GADGDKLLLV AALAMAALGF YLPNVVLSRL VEARQRTIFE DLPDALDLMT
VCVEAGLGLD AAMQRVAEEI GVKSRALKDE LELVLLELRA GSARDKALRN LALRTGVEDI
DTLTSMLIQA DRFGTSVGDS LRVFIDALRT RRRLRAEEQA AKIALKLLFP LMFCIFPTLI
VVLIGPAAMR VAHQLLPTMS GMH
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