| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5325 |
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| Symbol | |
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| ID | 6246810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2463215 |
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| End bp | 2464195 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642597046 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001861449 |
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| Protein GI | 186474107 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.61312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00813406 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATACGA CACTGCTGGC GTTCGCCGTT CTCGGTTTCG TCGCGATCGT GCTGCTGATC
GAGGGCCTGT ACGTGTTCTG GAACAGCCGG CACGGCCCTG TCGTCAAGCG GATGGATGCG
CGCATCCGTG CGATGTCGGC GGGCGGTCAC GTGAGCGGCG AGCAAATGTC GATTCTGAAG
CAGCGTCTGC TGAGTGAATC GCCGACCTTC ACGCGCGTGC TGATGCGTGT GCCGCGCGTG
CATCTGCTCG ATCTGTATCT GCAGCAGTCG GGGCTGCCGT GGTCGGTGGG CCGCTTCGTT
GGCTATTCGG CGGCGAGTGC GTTCGGCGGG CTGCTGTTCG GCATGGGCGG GATGCGCCTG
CCCGTCGTGC TCGCGCTGCC CGTGGCGGGC GGCGCCGCGC TGCTGCCGCT CGTGTATCTG
CGCAGCAGGC GCGCGAAGCG CGTCGTGCAG CTCGAGCGCC TGTTGCCCGA CGCCGCCGAT
CTGATCGCCC GCGCACTGCG CGCCGGCCAC TCGTTTCCCG CTGCGCTCGG CATGGTCGCC
GACGAGCTGC CGCAGCCGCT GGGCGGCGAA TTCCGCATCG CATTCGACGA GATCAATTGC
GGTGTGTCGA TGAACGACGC GCTGATGAAC CTCGTGAGCC GCGTGCCCGT CGACGACGTA
CGCTACTTCG TGATCGCCGT GCTGATCCAG CGCGAAGCGG GCGGCAACCT CGCGGAGATT
CTCGGCAACA TCGCCACCAT CATTCGCGAG CGGCTCAAGC TGCTCGCCAA GGTGCGCGTG
CTGTCGGCGG AAGGCCGGCT GTCGGCGTGG ATTCTTGGGC TGCTGCCGTT CATCGTGATC
GCCGCGCTGT CGGTGCTGAA TCCCGGCTAC TGCAAGGTGT TCTGGGAAGA CGAGACGGGC
CAGAAGATCG CGGGTGTCGC GCTGTCGATG ATGGCCCTCG GTGTGCTGTG GCTGCGCAAG
ACCGTACGGA TCCGCGTGTA G
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| Protein sequence | MDTTLLAFAV LGFVAIVLLI EGLYVFWNSR HGPVVKRMDA RIRAMSAGGH VSGEQMSILK
QRLLSESPTF TRVLMRVPRV HLLDLYLQQS GLPWSVGRFV GYSAASAFGG LLFGMGGMRL
PVVLALPVAG GAALLPLVYL RSRRAKRVVQ LERLLPDAAD LIARALRAGH SFPAALGMVA
DELPQPLGGE FRIAFDEINC GVSMNDALMN LVSRVPVDDV RYFVIAVLIQ REAGGNLAEI
LGNIATIIRE RLKLLAKVRV LSAEGRLSAW ILGLLPFIVI AALSVLNPGY CKVFWEDETG
QKIAGVALSM MALGVLWLRK TVRIRV
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