| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5324 |
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| Symbol | |
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| ID | 6246809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2461808 |
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| End bp | 2463196 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597045 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001861448 |
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| Protein GI | 186474106 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0350722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000466022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCATTGC GCGATCAACT GAGATTGCAG AGTGTGTCGA TCAACGGCGC GGCGGCGGGA
GCCGCTGCCG ACATGACGGC AGCAGGCGGC TTCGCCGAGA GCATGGCCGC GCGGCGCGCG
TATCAGCAGC TGAAGATGAA CGTGCACGAG AAGATCATCG ACCGCGTCGA ACTCGACAAA
CTGCAGCGCC TCACGCCCGA GCAGATCAGG CGCGAACTCG CGCAACTGGT CGAGCGCATT
GTCGACGAAG ACAAGATTCC AATGAACGAG ATCGAACGCC GGCGTCTCGC GCAGGACGTG
CACGACGAGA TGTTCGGCCT CGGTCCGCTC GAACCGCTGC TCGCCGACCC TACGGTATCG
GACATTCTCG TCAACACGTC GCAGCACGTG TACGTGGAGC GGCGCGGCAA GCTCGAGCGC
ACCGACATCA CCTTCTTCGA CGACGCGCAT CTGATGAAGA TCATCGAGCG CATCGTGTCG
CGGGTGGGGC GGCGCATCGA CGAATCGACG CCGATGGTCG ACGCCCGGTT GCCCGACGGC
TCGCGCGTGA ACGCGATCAT TCCGCCGTCC GCGATCGACG GGCCGCTCGT GTCGATCCGC
CGCTTCGCCG TGAATCCGTT GAAAGTGGAG GACATGGTGA AGAACCAGTC CTTCACCCCC
GCGATGGCGC AACTGCTCGA AGCGCTGATC AAGGCGAAGC TGAACGTGCT GATCTCGGGC
GGCACGGGCA GCGGCAAGAC GACCCTGCTC AACCTGCTGT CGGGCTTCAT TCCCAACGAC
GAGCGCATTG TCACCATCGA AGACGCCGCC GAACTGCAAC TGCGCCAGGA ACATGTGCTG
CGGCTCGAAA CGCGGCCGCC GAACATCGAA GGCAAGGGCG AAATCTCGCA GCGCTCGCTG
GTGAAGAACG CGCTGCGGAT GCGCCCAGAC CGCATCGTGC TCGGCGAAGT GCGCGGCGCG
GAAGCGCTCG ACATGCTGCA CGCAATGAAC ACGGGCCACG AAGGATCGAT GGCGACGCTG
CACGCGAACA CCCCGCGCGA CGCCCTGACG CGCCTCGAAA ACATGGTGGG GATGGCGGGC
CTGACGATGC CGATCAAGGC GATGCGTCAG CAGATCGCGT CGGCGATTAC GGTGGTCGTG
CAGGCGTCGC GCCTCACGGA TGGCCGCCGC AAGCTGATGA GCATCCAGGA AATCACGGGG
ATGGAAGGCG AGATCATCAA CATGCAGGAG ATCTTCACCT TCAGGCGCAC GGGTGTGGCG
GAAGACGGCA CGGTCAAAGG CTACTTCTGC GCGACGGGCG TTCGGCCCAA GTTCGCCGAC
CGGCTTGCCG CGTTCGGTCT CGCGTTGCCG GATCAGATGT TCGACCCGTC GCGGCGCTAC
GAAGTCTGA
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| Protein sequence | MSLRDQLRLQ SVSINGAAAG AAADMTAAGG FAESMAARRA YQQLKMNVHE KIIDRVELDK
LQRLTPEQIR RELAQLVERI VDEDKIPMNE IERRRLAQDV HDEMFGLGPL EPLLADPTVS
DILVNTSQHV YVERRGKLER TDITFFDDAH LMKIIERIVS RVGRRIDEST PMVDARLPDG
SRVNAIIPPS AIDGPLVSIR RFAVNPLKVE DMVKNQSFTP AMAQLLEALI KAKLNVLISG
GTGSGKTTLL NLLSGFIPND ERIVTIEDAA ELQLRQEHVL RLETRPPNIE GKGEISQRSL
VKNALRMRPD RIVLGEVRGA EALDMLHAMN TGHEGSMATL HANTPRDALT RLENMVGMAG
LTMPIKAMRQ QIASAITVVV QASRLTDGRR KLMSIQEITG MEGEIINMQE IFTFRRTGVA
EDGTVKGYFC ATGVRPKFAD RLAAFGLALP DQMFDPSRRY EV
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