| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5320 |
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| Symbol | |
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| ID | 6246805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2457122 |
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| End bp | 2457970 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642597041 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001861444 |
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| Protein GI | 186474102 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.201965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00316438 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAACG CTCGCGCGTT GGTGATGTTG CTCGTCGCGA CGGCGGCCGG TCTTGCCGCC
GTGGTGTTCG CGGCGCGCTG GATGGTACAG CAGACGTCGA CATCGACGAC CAAGGTGGTG
ATCGCGTCGG CCGACATGAG CCTCGGTCAG CGCGTTTCGC CCGAGATGCT GAAGGTGTCC
GACTGGCCCG CCGGCAGCGT GCCGCCCGGC ACCTTCAACG ATGTGAAGAA GCTCGAAGGC
CGTGTGCTGA AGGCGAGCCT GTCGCGCGGC GAGCCCGTGC TCGAGGCGAA GCTTTCGCCC
GTCGGCACGC TGGGCGGCCT GTCGGCCGTC ATCAACGAAG GCAAGCGTGC GATCACGGTG
CGCGTGAACG ATGTGATCGG CGTCGCAGGC TTTGCGCTGC CGGGCAACTA CGTCGACATT
CTGGTCAACA CCGAAAAGGA AAACGCCAGC CGGGAAGGCG CCGGCGCGTC GGGACGCGAT
CAGAACATCT CGAAGATCGT GCTCGAAAAG ATCCTCGTGC TCGCCGTGGC CCAGGAAGCG
GGACGCGACG AAACCAAGCC AAAGGTCGTC GATGCCGTGA CGCTCGAAGT CACGCCCGAA
CAGGCCGAGA AGATCGATCT CGCGCGCAGC ATCGGTTCGC TGTCGCTCGT GCTGCGCAAT
CAGGTCGACC CGCAGGACAC GTCGACGGCG GGCGCGACCA AGGCCACGCT GCTGAAGATT
CCCGTCGCCG CGCCGCCCGC CGCACCCGCC CCCGCGCCGA AGCCGGTGGT GCGCAAAGTC
GTTGCGCGGG CGCCGTCGAA CTGCGTGAGC GTGATCGACG GATCGCAGAC CAGACAGGAA
TGTTTTTGA
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| Protein sequence | MKNARALVML LVATAAGLAA VVFAARWMVQ QTSTSTTKVV IASADMSLGQ RVSPEMLKVS
DWPAGSVPPG TFNDVKKLEG RVLKASLSRG EPVLEAKLSP VGTLGGLSAV INEGKRAITV
RVNDVIGVAG FALPGNYVDI LVNTEKENAS REGAGASGRD QNISKIVLEK ILVLAVAQEA
GRDETKPKVV DAVTLEVTPE QAEKIDLARS IGSLSLVLRN QVDPQDTSTA GATKATLLKI
PVAAPPAAPA PAPKPVVRKV VARAPSNCVS VIDGSQTRQE CF
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