Gene Bphy_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5317 
Symbol 
ID6246802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2455420 
End bp2455596 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content61% 
IMG OID642597038 
ProductFlp/Fap pilin component 
Protein accessionYP_001861441 
Protein GI186474099 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.26673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000600158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAACG CGATCCAACA GTTTCTAGGC GAAGAAGACG GCGTGTCGGC GATCGAATAC 
GGCCTGCTGG CGGGGCTGAT CGCCGTGGCC ATCATCACGA CGGTCGGGCT CGTCGGAGGC
AGTCTGAACT CGGTGTTCAA CACGATCCAG ACGAAGCTGG CGGCGATCAC GGGCTGA
 
Protein sequence
MKNAIQQFLG EEDGVSAIEY GLLAGLIAVA IITTVGLVGG SLNSVFNTIQ TKLAAITG