Gene Bphy_5316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5316 
Symbol 
ID6246801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2455201 
End bp2455377 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content58% 
IMG OID642597037 
ProductFlp/Fap pilin component 
Protein accessionYP_001861440 
Protein GI186474098 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.351071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000566754 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAACG CAATCAAGCA GTTCCTGCGC GAAGAAGACG GCGTGTCGGC GATCGAATAC 
GGCCTGCTGG CCGGCTTGAT CTCGGTGGCC ATCATTACGA CGGTCGGCCT GATCGGCACC
AATCTGAACA CAGTCTTCTC GACGATTCAG ACGAAGCTGG CTGCCGTGAA GCCCTGA
 
Protein sequence
MKNAIKQFLR EEDGVSAIEY GLLAGLISVA IITTVGLIGT NLNTVFSTIQ TKLAAVKP