| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5313 |
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| Symbol | |
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| ID | 6246798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2450884 |
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| End bp | 2452512 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642597034 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001861437 |
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| Protein GI | 186474095 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00417718 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGACC GCGCTTCTCT CGACGGCACG CACCACACGC CGCACGCTTT CCCCGCCCAG
GCCAGTCCCT GCGACGATCT CGCGATCCGC GCGCACGCGG CAGACGGGCT TGCGTGCCGC
CACAAGCGGC TCGCCCTTGC CGCGACGATC CTCGGCTCCA GCATGGCGTT CATCGACGGC
TCCGTCGTCA ATGTCGCGCT CCCGTCCATC CAGAGCGAAC TGGGTGCCAG CGTCGCGGCG
ATGCAGTGGG TCGTCAACGC GTATCTGCTG CTGCTCGGGT CGCTGGTGCT CGTCGGCGGC
GCGATGGGCG ACAAGCTCGG CCGGCGCACG GTGTTCGTCG CGGGCATCGT GCTGTTCACG
GCGGCATCGG CGGCATGCGG GCTCGCGCCC GAATCCGGCG CGCTGATCGC AGCGCGCGCT
GCACAGGGCG CGGGCGCTGC GCTGCTGGTG CCGAGCAGTC TCGCGATCAT CGGCGCGGTG
TTCGACGAGC GCGAGCGCGG CCGCGCAATC GGCACCTGGG CCGGTTTCGG CGCGATCACG
TCGGCGCTCG GGCCTGTCGC GGGCGGCTGG CTCGTCGATG CGTTGTCGTG GCGCGCGATC
TTCTATCTCA ACGTGCCCAT CGCGCTGCTC ACGATCGCGC TGGCGCTGCC GTCCGTGCCG
AACAGCCGCG ATGCGCGTGC TACGCAGCGG CTCGACTGGG CGGGCGCGCT GACGGCGGCA
TTGGGGCTCG GCGCGCTGAC CTACGGCCTC ACGCTCGCGT CGTCGCACGG CTTCGACGAT
GAAATCGTGC TCGGCGCAAT CGCGTGCGGG CTTGCGTTGT GCGCCGCGTT CATCGCGATC
GAGGCGCGCA GCGCCGATCC GATGATGCCG CTCGATGTGT TTCATTCGCG AGATTTCAGC
GGCGCGAACC TCGTCACGCT GCTGCTGTAT TTCGGGCTTG GCGGCGCGCT GTTCTTCCTG
CCGTTCACGC TGATCCGCGC GCACGGCTAT ACGGCGACGC AGGCAGGCGC GGCGCTCTTG
CCCGTGCCCG TCGTGCTCGG CGTGCTGTCG CGCTTCACGG GCGGCCTCGC CGCGCGCTAC
GGCCCGCGCG TGCTGCTGAC GGCGGGGCCC GTGATCGCGG CAGCCGGCTT CGCGCTGCTC
GCGCTGCCTG GCTGGCTCGA CATGGACCGG GTGCGCTACT GGACCAGCTA CTTTCCCGCG
CTCGCCGTGC TCGGCCTCGG CATGACGATC ACGGTCGCGC CGCTGACGAC CACGGTCATG
ACGTCCGTGG CCGCCGCGCG CACGGGCGTC GCGTCCGGCA TCAACAACGC CGTGGCGCGG
ATCGCGAGCC TGCTGGCCAT CGCCGTGCTC GGCATCGTTT TCGTCTGGTC GCACGACGCG
GCGCTGTCCG CGCGGCTCGC ACAGTTGCAT ATTCCAACCG ATCTGCATCG CGCAGGCCAG
TTGCTCGCGC CGGACACGAT GGAAGGCGCC CATGCCGTGC CCGCCGCGAT CGTCGACGCG
CAGTCCGATG CGATCGACGT GGGCCTGCGC GCCGTCGCCC TGGTGTCGGC GCTATGCGCA
TTGCTGGGCG CCGCCTGCGC GGCCGCGACG ATACGCGGGC AACGCCGTAT GCCTGGCGGG
TCGCGCTAG
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| Protein sequence | MSDRASLDGT HHTPHAFPAQ ASPCDDLAIR AHAADGLACR HKRLALAATI LGSSMAFIDG
SVVNVALPSI QSELGASVAA MQWVVNAYLL LLGSLVLVGG AMGDKLGRRT VFVAGIVLFT
AASAACGLAP ESGALIAARA AQGAGAALLV PSSLAIIGAV FDERERGRAI GTWAGFGAIT
SALGPVAGGW LVDALSWRAI FYLNVPIALL TIALALPSVP NSRDARATQR LDWAGALTAA
LGLGALTYGL TLASSHGFDD EIVLGAIACG LALCAAFIAI EARSADPMMP LDVFHSRDFS
GANLVTLLLY FGLGGALFFL PFTLIRAHGY TATQAGAALL PVPVVLGVLS RFTGGLAARY
GPRVLLTAGP VIAAAGFALL ALPGWLDMDR VRYWTSYFPA LAVLGLGMTI TVAPLTTTVM
TSVAAARTGV ASGINNAVAR IASLLAIAVL GIVFVWSHDA ALSARLAQLH IPTDLHRAGQ
LLAPDTMEGA HAVPAAIVDA QSDAIDVGLR AVALVSALCA LLGAACAAAT IRGQRRMPGG
SR
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