Gene Bphy_5273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5273 
Symbol 
ID6246760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2398601 
End bp2399233 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID642596996 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001861399 
Protein GI186474057 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.452488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.071325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACA CCTCGCATCT GCTCGCATTC GCCCTCGTCG CGCTCGGCAT GGCGCTCACG 
CCTGGGCCCA ACATGGTCTA CCTGATTTCG CGCTCGATCT GCCAGGGCCG CACGGCCGGC
CTGGTCTCGC TCGGCGGCGT CGCGCTCGGA TTCGTGGTCT ACATGTTCTG CGCGGCGTTC
GGCATCACGG CGCTGCTGCT GGCCGTGCCG TTCGCGTACG ACACGCTGCG CTTCGGCGGT
GCGCTCTATC TGCTGTATCT CGCATGGCAG GCGGTGAAGC CAGGCGGACG CTCGCCGTTC
CAGGTACGCG ATCTGCCCGT CGACAGCCCG CGCAAGCTCT TTACGATGGG CTTCGTCACC
AATCTGCTGA ATCCGAAAAT CGCCGTGCTG TATCTGTCGC TGTTGCCGCA GTTCATCGAT
CCGCAACACG GCAGCGTGCT CGGACAATCG CTGATTCTCG GCGCGATTCA GATCGTGCTG
AGCATTTCCG TCAACTCGAC GGTGGCGATG ACGGCGGGAT CGATTGCCGT GTTTCTCTCG
CGCAAGCCGA CATGGCTGGT CGTGCAACGC TGGCTGATGG GTACCGTACT CGCCGGTCTC
GCCGTGAGGA TGGCCACGGA AGCGCGACGC TAA
 
Protein sequence
MPHTSHLLAF ALVALGMALT PGPNMVYLIS RSICQGRTAG LVSLGGVALG FVVYMFCAAF 
GITALLLAVP FAYDTLRFGG ALYLLYLAWQ AVKPGGRSPF QVRDLPVDSP RKLFTMGFVT
NLLNPKIAVL YLSLLPQFID PQHGSVLGQS LILGAIQIVL SISVNSTVAM TAGSIAVFLS
RKPTWLVVQR WLMGTVLAGL AVRMATEARR