| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5258 |
|---|
| Symbol | |
|---|
| ID | 6246747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2388501 |
|---|
| End bp | 2389085 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642596983 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001861386 |
|---|
| Protein GI | 186474044 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.960126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0530177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA GCGCTTCGAC CCTGGCGCGC GTCGCCATGC TGATCGGTAC AAGCCTCGCC
GGATGCGGAC ACAGCCCGGC CACGCACTAC GTCAGGCTCA ACGCGTCGCC ATCCGGTGCG
CTGCTCGCGA CGACTCGCAT CGCGCCCGTG CAATTGACGG CCGTGCATAT TCCCACTGTG
CTCGATCGGC CAGAAGTCGT CACCCAGGTC TCGCCGAACC GCCTCACGGT CGACGACCGT
AATCACTGGG GCGCACCGCT CGCGCAGATG ATGCGCGGCA CGCTGGCGCA AGATCTGACG
ATGCGCCTGC CCGCAGGCGC CTTCGTCTTC CCCGACGCAC CCGCGCCACC CGATACGCGC
ACGCTTGTCG TCACCGTGCT CGACGCCGAA GCCGACACGA AAACGATGAC GTTTCAGGCG
GGCTGGACGC TGCTGTCCGG ACAACCGCCG CACGTCACCT TGACGCGCGA GGTCACACTG
ACGTCGACGC TCACGAGCCG CGACGCTGCC GAACAGGCGG CAGCGTTGAG CCGGATTCTG
GGCGAGCTGG CGGATCGGAT TGTCGCGTCG ATCGTAGAGC GCTGA
|
|---|
| Protein sequence | MTRSASTLAR VAMLIGTSLA GCGHSPATHY VRLNASPSGA LLATTRIAPV QLTAVHIPTV
LDRPEVVTQV SPNRLTVDDR NHWGAPLAQM MRGTLAQDLT MRLPAGAFVF PDAPAPPDTR
TLVVTVLDAE ADTKTMTFQA GWTLLSGQPP HVTLTREVTL TSTLTSRDAA EQAAALSRIL
GELADRIVAS IVER
|
|---|
| |