| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5246 |
|---|
| Symbol | |
|---|
| ID | 6246735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2372803 |
|---|
| End bp | 2373849 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642596971 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001861374 |
|---|
| Protein GI | 186474032 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0170348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC GCACGTTCGG CGCCACGCAA ACCAGCGGCG CCCGTGACGA GGCGGCGACG
GGCGACGGCA TGCTGTTCGA CATCGCCGTC GTCGTGCCGA CCTACCGACG GCCCGCGATG
CTCGAAACCT GCCTGAACGC GCTGGCCGCA CAGGACTTCG ATGCGACGCG CTATGAGATC
GTCGTGTGCG ACGACGGTCC CGACGATGCG ACGCGCGCAG CCGTCGAGCA GTTGGCGCTG
CGCGTCGCCG GGCGCGGCCC GGCCGTGCGC TATGTGCCCG TCAGCGATAC GCAAGGCCCC
GCCGCCGCGC GCAATGCGGG CTGGCGCGCG GCGCGCTCGC CGCTGATCGC GTTCACCGAC
GACGATACCG TCGCCGATCC GCACTGGCTC ACGGCCGGCG CAGCCGCGCT CGCGACGGGC
GCCGACGCCG CATCGGGCAG GATCGTGATG CCCTTGCCCG ACGATCCCAC CGACTATGAA
CTCGATGCGA GCGGCCTCGC ACGCGCGGAG TTCGCCACCG CAAATGCCTT TGTGCGCCGC
GCACGGCTGG CGACAATGGG CGGCTTCGAC GAGCGCTTCA CGTCCGCATG GCGCGAGGAT
TCCGATTTGC AATTCGCCGT GCTGCAGGCG GGCGGCCGCA TCGTGCACGC ACCCGATGCC
GTCGTCGTGC ACCCCGTGCG CCCCGCTCGC TGGGGCGTGA GTCTGTCGCA GCAGAAGAAG
AGCCAGTTCG AGGCGTTGCT GTATCGCAAG CATCCCGCGT TGTACCGGCA GCGGATCGAC
GCGAGGCCGC CGCTGCGCTA CTACGCAATC GTCGCGAGCC TGTTGTGCGG CGTCGCTGCC
GCGCTTGCGG GAAACGTGGC GCTCTCGGCT GCGGCGCTGC TTCTGTGGTG CGGTTTGACG
TCGGCATTTT GCGTCGCACG GCTGCGTCAT ACGCGCCGCG ACCTCGGGCA TGTCGCCGAA
ATGGCGTGGA CGTCGACGCT CATCCCGTTC CTGTCGATCT ATTGGCGCCT GCGCGGCGCG
CTTCGCTACA AGGTGTTCTT CCTGTGA
|
|---|
| Protein sequence | MNARTFGATQ TSGARDEAAT GDGMLFDIAV VVPTYRRPAM LETCLNALAA QDFDATRYEI
VVCDDGPDDA TRAAVEQLAL RVAGRGPAVR YVPVSDTQGP AAARNAGWRA ARSPLIAFTD
DDTVADPHWL TAGAAALATG ADAASGRIVM PLPDDPTDYE LDASGLARAE FATANAFVRR
ARLATMGGFD ERFTSAWRED SDLQFAVLQA GGRIVHAPDA VVVHPVRPAR WGVSLSQQKK
SQFEALLYRK HPALYRQRID ARPPLRYYAI VASLLCGVAA ALAGNVALSA AALLLWCGLT
SAFCVARLRH TRRDLGHVAE MAWTSTLIPF LSIYWRLRGA LRYKVFFL
|
|---|
| |