| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5238 |
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| Symbol | |
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| ID | 6246728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2362644 |
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| End bp | 2364218 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642596964 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001861367 |
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| Protein GI | 186474025 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0394755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAGT TGACGTGGTG GCAACGCGGT GTGATCTATC AGATCTATCC GCGCTCGTTT
CAGGATAGCA ACGGCGACGG CATCGGCGAT CTGCGTGGCA TCGCCGAACG CCTCGAATAT
GTCTCTGCGC TAGGCGCCGA CGCGGTGTGG ATATCTCCCA TCTTTCCTTC TCCCATGGCC
GATTTTGGCT ATGACGTGGC GGACTACTGC GGCATAGATC CGCTGTTCGG CAGCCTGTCC
GAATTCGAGC AATTGGTGAT CCACGCTCAT CACCTCGGGC TCAAGGTGCT GCTCGATTTC
GTTCCGAACC ATTCGTCGAA CCGGCATCCG TGGTTCGAGG AAAGCCGCTC GTCGCGTGAC
AATGCGAAGC GAGACTGGTA CCTGTGGCAC GATCCCGCGC CGGATGGCGG CCCCCCGAAC
AACTGGTTGA GCCGCATGGG CGGCTCTGCC TGGGAGTGGG ACGAGCATAC GGAGCAGTAT
TATTATCATG CGTTCCTGCG CGAGCAGCCC GATCTGAACT GGCGTAACCA CGAAGTGCGC
CGCGCGATGG ACGGTGTATT GCGGTTCTGG CTCGATCGCG GCGTCGACGG ATTCCGCGTA
GACGTGTTGT GGCTGTTGAT CAAGGATGCA CAGTTCCGGG ACAATCCTTT GAACCCCTGC
TATCGGGCCG GCGAGCCGGA ACATCATCGG CTATTGCAGA CATACACCGA AGACCAGCCG
GAAGTGCATG AGATCGTGCG CGCCATGCGG GCTACGCTGG ACATATACGG TGATCGTGTG
CTGATCGGCG AAATCTATCT GCCGGTTTCG CAGCTGATCA AATACTACGG CGCGGCAGGC
GACGGCGCGG ACATGCCGTT CAATTTCCAG TTGATCAACG CCAGATGGAA CGCCGCCGTG
ATTGCCGGCA TGATTCGCGA CTACGACGGC GCGTTGCCCG AGCATGCGTG GCCAAACTGG
GTACTGGGCA ATCACGACAA TCCGCGCATT GCATCGCGCG TGGGCGCAAT CCAGGCGCGC
GTAGCCGCTG TGCTGCTGCT GACATTGCGA GGAACGCCGA CAATCTATTA CGGCGACGAA
ATCGGAATGA CGGATGGCAC CATCGGGCCT GACGAGATCA GGGATCCGGC TGAGCTTCGG
CAACCGGGCG CGGGTCAGGG CCGCGATCCC GAGCGCACGC CCATGCAATG GGATGATTCG
TTGCCGAACG CGGGCTTTAC GAGCGGGAAA CCGTGGTTGC CCGTGGCGTC GAGGTCAAGC
GTGCGCGAAC AGGAGGGCGA TACGTCGAGC ATGCTCTCGC TCTACCGGCG GCTTCTTATC
TTGCGGCGCT GCCACGCCGC GCTCGTGCAA GGCACGATTG AGAACGTCGC TGCACATGGC
GACGTGCTCA CGTATGAACG GCATTACCGC GAGCGATCGC TTTTCGTCGC ACTGAACTTC
GGAGGCGAAG CTAGCGCATT TGAATCGCGG CCGGCCACCG TCCTGTTATC GACTGCGATG
GGGCGCGACG GCGGGCCACT AACGCATGGC ACCAATGCTC TCGCTGCGGG AGAAGCGCTG
GTCGCGTCCA TGTGA
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| Protein sequence | MRELTWWQRG VIYQIYPRSF QDSNGDGIGD LRGIAERLEY VSALGADAVW ISPIFPSPMA
DFGYDVADYC GIDPLFGSLS EFEQLVIHAH HLGLKVLLDF VPNHSSNRHP WFEESRSSRD
NAKRDWYLWH DPAPDGGPPN NWLSRMGGSA WEWDEHTEQY YYHAFLREQP DLNWRNHEVR
RAMDGVLRFW LDRGVDGFRV DVLWLLIKDA QFRDNPLNPC YRAGEPEHHR LLQTYTEDQP
EVHEIVRAMR ATLDIYGDRV LIGEIYLPVS QLIKYYGAAG DGADMPFNFQ LINARWNAAV
IAGMIRDYDG ALPEHAWPNW VLGNHDNPRI ASRVGAIQAR VAAVLLLTLR GTPTIYYGDE
IGMTDGTIGP DEIRDPAELR QPGAGQGRDP ERTPMQWDDS LPNAGFTSGK PWLPVASRSS
VREQEGDTSS MLSLYRRLLI LRRCHAALVQ GTIENVAAHG DVLTYERHYR ERSLFVALNF
GGEASAFESR PATVLLSTAM GRDGGPLTHG TNALAAGEAL VASM
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