| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5221 |
|---|
| Symbol | |
|---|
| ID | 6246711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2347002 |
|---|
| End bp | 2347556 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642596947 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_001861350 |
|---|
| Protein GI | 186474008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.520498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.214637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACC GTCTGCCATC TTTCGACGCC AGCCACGCGA CGCCCGAGCA GAAGGCCGTG
CTCGACGAGA TCCTGTCGGG TCCGCGCGGC AATCTGAACG GACCGTTTCT CGGCTGGATC
CATAGTCCCG AACTCGCGCA GCACGCGCAG CGCCTCGGCG CATTCTGCCG CTACAAGACG
GGCCTGCCGC TGCGTCTGTC GGAACTGGCG ATACTCGTCA CGGCGGCGCG CTGGCAGGCG
CAGGCCGAAT GGTTCATCCA TTATCCGATC GCAATCGAAG CGGGCGTGCG CATCGAAGAC
GCCGAGGCGA TCCGCGAGCG CAGGCTGCCT GCCTTCGCCG ATGCCGACGA CGCGCTGATC
TACGCCTTCG CAACCGAGCT TTACGACGCC AGACGCGTGT CCGATGCGAC ATATGCGAAG
ACCGTCGAGC GCTTCGGCCA CGAGGTTACG ATCAATCTGG TCGGACTGCT CGGCTATTAC
GCGCTTGTCG CGATGACGCT GAATGTGTTC GGCATGCGCG CGCAAGGGCA GGACTCGCTG
CCGTTCGGCG AGTAA
|
|---|
| Protein sequence | MTNRLPSFDA SHATPEQKAV LDEILSGPRG NLNGPFLGWI HSPELAQHAQ RLGAFCRYKT
GLPLRLSELA ILVTAARWQA QAEWFIHYPI AIEAGVRIED AEAIRERRLP AFADADDALI
YAFATELYDA RRVSDATYAK TVERFGHEVT INLVGLLGYY ALVAMTLNVF GMRAQGQDSL
PFGE
|
|---|
| |