| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5179 |
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| Symbol | |
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| ID | 6246671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2295177 |
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| End bp | 2296691 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642596907 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001861310 |
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| Protein GI | 186473968 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.466605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCCCAA ACTTTGTCAG GCGCGCGGCC GTTATCGCGG GCCGCCGTCC CTGCATCGTG
GGCGCGCTCG GTACGCTGCT TGCGGCGGCT GTTCTGGGCG TGAGCCTGCT AACACTGGTT
GCCGCGCGCG ACACAGCGAT TCGCCACGCC CACGAGACAT CAAGGAATGT TGCCGCGGTA
TTGTCGAGCA ATATCTCGCA CACCGTCGAA TCCTCGGATC AATCGTTAAG GACGCTTATC
GCCTCTCTTG ACAAGCCGGC CGTCCAACAT CTGGACGCGG ACGTGCGGCA CGAACTGCTG
TTCAACCGCA CCGCGACTTC GCAATATGTG ACGGGCATGG GCGTGACCAA TGAGCACGGG
CAGTTGATGG ACGGGTGCTG TTCGAGCACG CATCACTGGG ACTTCAGCGA CCGCGATTAC
TTCCTCGTAC ATCGCCAGTC GGCGAACGTG GGCCTGTATG TTTCCGCAGT GTATCGGGCG
CGCTCGCGCG AGGGCGTGGA AGCCTTGGCA CTGAGCAGGC GGATCGACAA CGCCGACGGT
TCTTTCAAGG GCGTGGCGCT GGTCGCCATC GACGTGGCGT ACTTCAGCCG CCTGCTTGAC
GGGCTGAACG TCGGACCGGG CGGTGTCACG GCAATCGTTC GGACCGACGG CACACTTGTC
GCAAGGAATC CTTATATACG ACTGGCGCTT GTACCGAACT TCAGTAAATC GCTGACGTTT
CCGCGCATGG TGAACCAGGA CTCCGGCTTC TATGCGGCAC GCTCGCCGAC GGATGGCGTG
CTGCGACTTT ATACGTTTCA GCGCGTGCCG GGTACGCCGC TGATTGCAGT CGTCGCGCCG
GCGCTCGACG ACGTGCTCGC CTCATGGAAG ACGCTTTCGT GGATCGTAGG CACTTCCGCT
TGCGCTATCA GTTTCGCGTT TTGCGCGGTG GTCTGGTTGT TGGCGTTTGC ATTGCGCGAC
CGGGCTCTCG CCGAAGACCG CTTGACGGAG CTCACGCAAA CCGACTCGCT CACGGGACTC
AAGAACCGAC GCGCGCTCGA CGAGGTGCTG GAAGCCGAGT GGGAGAGATT GCAGCGTACG
GCGAGCTGTC TCTCCGTTCT CTATGTGGAT GCCGATCATT TCAAGCAATA CAACGACAAA
TACGGGCACG CGGCAGGCGA CAAGGCGTTG AAGCATCTCG CCGACTGCAT CGCGCAACGC
GCGTGCCGTC GCAGTGACTG CGCCGCCCGT TATGGTGGCG AGGAATTCGT GGTCGTATTG
CCCGACACCG ACGCGGCGAA CGCGGCGCGC GTTGCCGAAG GCATACGCGA GGCATTGGAA
CGATCATGGC ATGCACGGCA TGAGGCTGGA ACGGCTGAGC TTCATCCGTT CACGGTCAGC
GTCGGATGCG CGACAGGTCG ACGCGGTTGC CCTGCCACTC TGGACGAACT GACGAAGGCG
GCGGACCTTG CGCTATACGA AGCCAAGAAT GCCGGTCGGA ATTGCGTCAG AGCGGCGGCC
ATGGCCCATT CCTGA
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| Protein sequence | MFPNFVRRAA VIAGRRPCIV GALGTLLAAA VLGVSLLTLV AARDTAIRHA HETSRNVAAV
LSSNISHTVE SSDQSLRTLI ASLDKPAVQH LDADVRHELL FNRTATSQYV TGMGVTNEHG
QLMDGCCSST HHWDFSDRDY FLVHRQSANV GLYVSAVYRA RSREGVEALA LSRRIDNADG
SFKGVALVAI DVAYFSRLLD GLNVGPGGVT AIVRTDGTLV ARNPYIRLAL VPNFSKSLTF
PRMVNQDSGF YAARSPTDGV LRLYTFQRVP GTPLIAVVAP ALDDVLASWK TLSWIVGTSA
CAISFAFCAV VWLLAFALRD RALAEDRLTE LTQTDSLTGL KNRRALDEVL EAEWERLQRT
ASCLSVLYVD ADHFKQYNDK YGHAAGDKAL KHLADCIAQR ACRRSDCAAR YGGEEFVVVL
PDTDAANAAR VAEGIREALE RSWHARHEAG TAELHPFTVS VGCATGRRGC PATLDELTKA
ADLALYEAKN AGRNCVRAAA MAHS
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